Gene Information

Name : Ajs_1398 (Ajs_1398)
Accession : YP_985689.1
Strain : Acidovorax sp. JS42
Genome accession: NC_008782
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG3451
EC number : -
Position : 1464723 - 1467590 bp
Length : 2868 bp
Strand : -
Note : KEGG: xcv:XCV2367 hypothetical protein

DNA sequence :
ATGCGCTGGAAACTTCCCTGGCCGAAGCTGGCCGCATCCAGCGCCAGCGACGACGAGCAGCCGGACGGTTGGCAGCGCCA
CGTCGATGCCTTGCGCCAGGCCGGCATCCCCGAACCTGGCGCAGCGGTCCAGGGCCGCAGGCCGGCGACGGTAGCCGACG
AGCAGGCGCTGTACGACGTCGCACCGTCGTTCGCGGAACTGCTGCCTTGGGTGGAGTTCCTGCCGCAGTCGAAGTCCATG
CTGCTGGAGGATGGGCAGTCGGTCGCTGCCTTCTACGAGCTGGTGCCGCTGGGCACCGAGGGCCGGGAACCCGGCTGGCT
TGCGCATGCCCGCGATGCCTTGGAGAACGCGCTCCAGGACTCGTTCGATGAGCTGGACGAAAACCCCTGGGTGCTCCAGC
TCTACGCCCAGGACGAGCCCAGCTTCGACCAGTACATGCAGACCCTGCGCGACTATGTGCAGCCGCGCGCCCGGGATACC
GCGTTCACCGAATTCTACCTGCGCTTCTTCGGCCACCATCTGCGCGCGGTCGCCAAGCCGGGCGGCCTGTTCGAGGACAC
GGTAGTCACGCGGCTGCGCTGGCGCGGCCAGACGCGGCGGGTGCGCATGGTGATCTATCGCCGTGCCACCGGGCAGGCAA
GCCGCCGCGGCCAGACACCCGAGCAGATGCTGAACATCGTCTGCGACCGCCTGTGCGGCGGCTTGGCGAACGCCGGCATC
CAGGCACGGCGCATGGTCGCAGCCGACGTCCACGACTGGCTGCTGCGGTGGTTCAATCCGCGCCCCGCGATGCTCGGGCC
GAGTGCAGAGGACCGGGAGCGCTTCTACGCGCTGGCGCGCTACCCCGACGAGACCGAGGAAGGCGAAATCGAGCTGGCGA
GCGGGCGGGATTTCAGCCAGCGGTTGTTCTTCGGCCAGCCACGCTCCGACGTGGAGCACGGCACCTGGTACTTCGACGGC
ATGCCGCACCGTGTGCTGATCACCGACCGGCTCCGCATGCCGCCCGCCACGGGTCACCTGACGGGCGAAACCCGCAAGGG
CGATGCGATCAACACCCTGTTCGACCAGATGCCGGAAGACACCTTGATGTGTCTCACCATGGTCGCCACACCGCAGGATG
TGCTGGAAGCGGACTTGAACCACCTGGCGAAGAAGGCCGTGGGCGAGACGCTGGCGTCGGAGCAGACGCTCAAGGACGTG
CAGGAGGCGCGGTCCCTGATCGGCAGCGCGCACAAGCTCTACCGGGGAACGCTGGCGTTCTACCTGCGCGGGCGCGACGA
GGCGGAACTGGACCGGCGCGGCCTGGACCTGGCGAACGTGATGCTCAACGCCGGCTTGCAGCCGGTGCGCGAGGACGACG
AGGTGGCGCCACTCAACAGCTACTTGCGCTGGCTGCCGTGCTGCTACAACCCCGGCCAGGATCGGCGCAGGTGGTACACC
CAACTGATGTTCGCGCAGCACATCGCGAACGTATCGCCGGTGTGGGGCCGCGCCCAGGGTACCGGGCATCCCGGCATCAC
CGTGTTCAACCGCGGCGGCGGCCCGATCACGTTCGATCCGCTCAACCGCCTAGACCGACAGATGAACGCCCACTTGTTCC
TGTTCGGCCCCACCGGCTCCGGCAAGAGCGCCACGCTCAACAACCTATTGAATCAGGTCACGGCCATCTACCGGCCAAGG
CTGTTCATCGTGGAAGCCGGCAACAGCTTCGGCCTGTTCAGCGACTTCGCCAAGCGCCTGGGCCTGACCGTGAACCGGGT
CAAGCTGGCCCCCGGCTCGGGCATCAGCCTGGCCCCCTTCGCCGACGCGCGCCGGCTGATCGAGACGCCCAGCGACGTGC
AGACGCTCGATGCCGATGCGCTGGACGAAGACCTGCCACCGGATGTCGCGGCGATGGAGGCAGACGAGCAGCGCGACGTG
CTGGGCGAACTGGAGATCACGGCACGGCTGATGATCACGGGCGGCGAAGACAAGGAAGAAGCGCGGATGACGCGGGCCGA
CCGCTCGCTGATCCGCCAGTGCATCCTCGACGCCGCCGAACATTGCGTGGCGGAGAAGCGCACCGTGCTCACGCGCGATG
TGCGCAATGCACTGCGCACCCGTGGCCAGGACCCGACGTTGCCCGAGATGCGCCGTGCGCGGCTGCTGGAGATGGCGGAC
GCGATGGACATGTTCTGCCAAGGCACGGACGGCGAGATGTTCGACCGCGACGGCACGCCGTGGCCCGAGGCCGACATCAC
GCTGGTCGATCTGGCGACCTATGCCCGCGAGGGCTACAACGCGCAGCTCTCCATCGCCTACATCAGCCTGATCAGCACGG
TGAACAACATCGCCGAGCGCGACCAGTACCTGGGACGGCCGATCGTCAACGTGACCGACGAAGGTCACATCATCACCAAG
AACCCGCTGCTCGCGCCCTACGTCGTGAAAATTACAAAAATGTGGCGCAAGTTGGGCGCCTGGTTCTGGCTGGCGACGCA
GAACATCGACGACCTGCCACGTGCAGCGGAGCCGATGCTCAACATGATCGAGTGGTGGGTGTGCCTGTCGATGCCGCCGG
ACGAGGTGGAGAAGATCGCGCGCTTCCGCGAACTCTCGCCGGCGCAGAAGGCGCTGATGCTCTCCGCACGCAAGGAAGCG
GGCAAGTTCACCGAGGGCGTCATCCTCTCCAAGAGCATGGAAGTGCTGTTCCGCGCCGTGCCGCCAAGTCTCTACCTCGC
GCTCGCGCAAACCGAGCCCGAGGAGAAGGCAGAACGCTACCAACTCATGCAGCAGCACGGCGTCAGCGAGCTGGATGCCG
CCTTCAAGGTGGCTGAGAAGATCGACCGGGCACGTGGCATCGAGTCGCCGGCCTTGGAACTGTCGTAA

Protein sequence :
MRWKLPWPKLAASSASDDEQPDGWQRHVDALRQAGIPEPGAAVQGRRPATVADEQALYDVAPSFAELLPWVEFLPQSKSM
LLEDGQSVAAFYELVPLGTEGREPGWLAHARDALENALQDSFDELDENPWVLQLYAQDEPSFDQYMQTLRDYVQPRARDT
AFTEFYLRFFGHHLRAVAKPGGLFEDTVVTRLRWRGQTRRVRMVIYRRATGQASRRGQTPEQMLNIVCDRLCGGLANAGI
QARRMVAADVHDWLLRWFNPRPAMLGPSAEDRERFYALARYPDETEEGEIELASGRDFSQRLFFGQPRSDVEHGTWYFDG
MPHRVLITDRLRMPPATGHLTGETRKGDAINTLFDQMPEDTLMCLTMVATPQDVLEADLNHLAKKAVGETLASEQTLKDV
QEARSLIGSAHKLYRGTLAFYLRGRDEAELDRRGLDLANVMLNAGLQPVREDDEVAPLNSYLRWLPCCYNPGQDRRRWYT
QLMFAQHIANVSPVWGRAQGTGHPGITVFNRGGGPITFDPLNRLDRQMNAHLFLFGPTGSGKSATLNNLLNQVTAIYRPR
LFIVEAGNSFGLFSDFAKRLGLTVNRVKLAPGSGISLAPFADARRLIETPSDVQTLDADALDEDLPPDVAAMEADEQRDV
LGELEITARLMITGGEDKEEARMTRADRSLIRQCILDAAEHCVAEKRTVLTRDVRNALRTRGQDPTLPEMRRARLLEMAD
AMDMFCQGTDGEMFDRDGTPWPEADITLVDLATYAREGYNAQLSIAYISLISTVNNIAERDQYLGRPIVNVTDEGHIITK
NPLLAPYVVKITKMWRKLGAWFWLATQNIDDLPRAAEPMLNMIEWWVCLSMPPDEVEKIARFRELSPAQKALMLSARKEA
GKFTEGVILSKSMEVLFRAVPPSLYLALAQTEPEEKAERYQLMQQHGVSELDAAFKVAEKIDRARGIESPALELS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C47 AAN62141.1 hypothetical protein Not tested PAGI-2(C) Protein 0.0 96
ORF SG57 AAN62279.1 hypothetical protein Not tested PAGI-3(SG) Protein 0.0 80
virB4 CAI36125.1 VirB4 component Not tested PPHGI-1 Protein 0.0 67
RL022 AAP84149.1 conserved hypothetical protein Not tested PAPI-1 Protein 0.0 63
EXA33 ABD94642.1 conserved hypothetical protein Not tested ExoU island A Protein 0.0 63
unnamed ABR13362.1 hypothetical protein Not tested PAGI-5 Protein 0.0 62
YE3482 YP_001007641.1 hypothetical protein Not tested YAPI Protein 0.0 53
YpsIP31758_3705 YP_001402659.1 hypothetical protein Not tested YAPI Protein 0.0 53
STY4573 NP_458658.1 hypothetical protein Not tested SPI-7 Protein 0.0 52
api39 CAF28513.1 hypothetical protein Not tested YAPI Protein 0.0 52
PMI2576 YP_002152295.1 hypothetical protein Not tested Not named Protein 0.0 52
Pmu_03070 YP_005176206.1 conjugative transfer ATPase TraC-like, PFL family Not tested ICEPmu1 Protein 0.0 49