Gene Information

Name : Ajs_1393 (Ajs_1393)
Accession : YP_985684.1
Strain : Acidovorax sp. JS42
Genome accession: NC_008782
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1460289 - 1461686 bp
Length : 1398 bp
Strand : -
Note : KEGG: xcv:XCV2362 hypothetical protein

DNA sequence :
ATGAAGATTCGTACCGCACTCAATCCGCTCTCCCGCCAGGCACGCCACACGAAGATCGTCCTGGCGCTGGCCGGCACGCT
CGCGCTGGCCAGCGGCGTGGCCTGGGGCCAACTGGGCTACCAGACCAGCGGCAGCGTCATCGGCGATGACGTCATGTACT
CGATCGGCGGCGGCAGTGCCGTGTCGATGGGACGCGCGGCCGGCATGCGCTCCCTCGGGGTGGGCGTGGGCTGGAACAGC
AACTTGATCTGCGGCGACATGAGCATCCAGACCACGTTGAAGAACCAGCTCAACGGCATCACCAACGGCTTCCAGCAAAT
CATGTCGTCAGTGATCCAGAGCGCCACCAGCGCGGTGGCGTCTTTGCCTGCGCTGATCATCCAGCGCGCCGATCCCGGCC
TCTACAACCTGCTTACCAATGGCGTGCTGCAGGCACGTCTCGATTTCGACCGCTCCAAGCTGACGTGCCGTGCCATGGCC
GAGAAGATGGCCGACACGGCAGGCGGCCAGCTCGGCTGGAGCCAGATGGCCGAAGGCTTGGCGCTGCGCGATGCTGTGTC
GAGTACGGATGCGGTCTCGGCCATCGAGCAGGCCGAGACGCGCCGCGGCAATGACGGCGTGCCGTGGATCGGGGGCAGCA
ACGCGGGCGGCTCCGGTCAGCCCGCAATCAAGGTCGTCGGCGATGTCACCCGCGCCGGCTACAACCTGGTCAACGGCCGC
GGCGTGACCGATACGTCGTCCATCGCGCCGTCCAGTTGCAGCAGCCTCTCGTGCCAGACCTGGGCCTCGCCGCAGGCGGC
CGTCGAGTGGGCCACGCGCGTGCTCGGCGAGAAGGAACAACGCACTTGCGATGCCTGCACAAAGACCGAGACGACGCCCG
GCGTCGGGCTGACGCCGCTGATCCAGGAAGAGTACGACGCGAAGCTGCAGGCGCTCCAGGGTCTCGTCTCCAAGGCGAAG
AACACGACGCCGGAGAACCTGCGCGAGGCCGGCAGTGCATCGCTGCCGATCACGCGCGGCGTGATCGAAGCACTGCGCGA
CGAGCCCGACCAGCATCTGCTGTCGCAGCGCCTGGCGTCCGAGGTCGCGCTGTCGTCCGTGCTGGAGAAAGCGCTGCTGC
TGCAGCGCACGCTGCTCACGGGGAAGAAGGAGCCCAACGTCGCGGCCAACGAGCTTGCGGTGGATGCCGTAAACAAGGAG
AGCGACACACTCGACCGCGAAATCCGCAACCTCAAGACGGAACTGGAGCTGCGGCGCGAGCTGGCGAACAATTCGCCCAT
GGCGATCATCCAGCGCCACGGCGCGCGCGCGACTGGCTCGCGCGGCATCTACGAGGGCGACCCGGTGCCTGATCGTCTCG
ACCAGCTCCAGAAGGGCAATCCGGGGAGTCAGCCATGA

Protein sequence :
MKIRTALNPLSRQARHTKIVLALAGTLALASGVAWGQLGYQTSGSVIGDDVMYSIGGGSAVSMGRAAGMRSLGVGVGWNS
NLICGDMSIQTTLKNQLNGITNGFQQIMSSVIQSATSAVASLPALIIQRADPGLYNLLTNGVLQARLDFDRSKLTCRAMA
EKMADTAGGQLGWSQMAEGLALRDAVSSTDAVSAIEQAETRRGNDGVPWIGGSNAGGSGQPAIKVVGDVTRAGYNLVNGR
GVTDTSSIAPSSCSSLSCQTWASPQAAVEWATRVLGEKEQRTCDACTKTETTPGVGLTPLIQEEYDAKLQALQGLVSKAK
NTTPENLREAGSASLPITRGVIEALRDEPDQHLLSQRLASEVALSSVLEKALLLQRTLLTGKKEPNVAANELAVDAVNKE
SDTLDREIRNLKTELELRRELANNSPMAIIQRHGARATGSRGIYEGDPVPDRLDQLQKGNPGSQP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C42 AAN62135.1 hypothetical protein Not tested PAGI-2(C) Protein 1e-176 90
ORF SG50 AAN62272.1 hypothetical protein Not tested PAGI-3(SG) Protein 4e-150 77
pph90 CAI36131.1 hypothetical protein Not tested PPHGI-1 Protein 3e-135 66
unnamed ABR13356.1 hypothetical protein Not tested PAGI-5 Protein 4e-125 64
EXA19 ABD94628.1 conserved hypothetical protein Not tested ExoU island A Protein 1e-126 63
RL016 AAP84143.1 putative pathogenesis-related protein Not tested PAPI-1 Protein 4e-126 62
api55 CAF28529.1 putative exported protein Not tested YAPI Protein 2e-72 42
YE3466 YP_001007627.1 hypothetical protein Not tested YAPI Protein 3e-72 42
YpsIP31758_3700 YP_001402654.1 hypothetical protein Not tested YAPI Protein 2e-72 42
unnamed AAX39459.1 unknown Not tested Hrp PAI Protein 1e-73 42
t4274 NP_807872.1 hypothetical protein Not tested SPI-7 Protein 4e-73 41
STY4577 NP_458662.1 hypothetical protein Not tested SPI-7 Protein 4e-73 41