Gene Information

Name : Ajs_1357 (Ajs_1357)
Accession : YP_985650.1
Strain : Acidovorax sp. JS42
Genome accession: NC_008782
Putative virulence/resistance : Unknown
Product : cytochrome c biogenesis protein transmembrane subunit
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG4232
EC number : -
Position : 1425179 - 1427017 bp
Length : 1839 bp
Strand : -
Note : PFAM: cytochrome c biogenesis protein, transmembrane region; Thioredoxin domain; KEGG: xcv:XCV2308 putative thiol:disulfide interchange protein

DNA sequence :
TTGGCTTTTTATCGGCGCATAGTTGCGATCTTTCTACTGTGTTGTTGCATGGTCGGCAGCGCCTGGGCGAATGGCCTTCT
TCCCTCCTGGGGCAGTAGCGAACGGCAGTTTTTGGACGTTGCCGAAGTATTCAAGCTGGACCCAGCGCAGCAACAAGGCG
ACTCGTTCTTAATTGCAGGACATATCGCCGATGGCTACTACGTTTACCGCCATGCCATCAAATTGGTCGATGCGCGGGGC
CATGAGATCAGCCTGACCCTTCCAGCAGGAACTGCCAAGCACGACGAGTTCTTTGGCGACACGGAAATCTATAAGGGTGA
TGCGCTCAATCTGCGCTTTCCCGTCACTGCCGCCGGCCCGCTGACACTCCATTGGCAAGGGTGCGCCGAAGCAGGCATCT
GCTATCCGCCGCAGACCGTGAACCTGGCACTGCCGGAAGTGGCAGCAGGCACATCTACCGCAGGCAATGGCTCCACACAC
GAGAGCCCAACCGCGGCACCCGCCAGCCAAGGCAGCGTGGCGGGGGCGACCGAGATCGCCGAGGATCAAGCGGCAGCGCA
GCGGCTTGCCGCACTCGGCCCCGTATGGGGAACGCTGCTGTTCTTCGGCTTCGGGTTGCTGTTGGCCTTCACGCCATGCT
CGCTGCCGATGATCCCCATCGTCTCCTCCATGGTCGTAGGCAGCCAAGCCAAGCCGCGACGGGCCTTCTTCCTCTCGCTG
TCCTATGTCGTGGCAATGGCGGGCACCTACGCGGTGGTGGGTGTGGCCGCTGGCATGGCCGGTGCCAACCTGCAGGCCAC
CCTGCAATCGCCTTGGCTGCTGGGAGCGTTCGCGGCCCTGTTCCTCGTCCTGGCGAGTTCGTTGTTCGGCCTGTTCGAGC
TGCAGATGCCTTCGGCCCTGGTCAATCGTGTCGAGTCTGCCGGCAGAGACCGCTCGGGCGGCAGCATCCCCGGCGCTGCA
GCACTGGGCTTCCTCTCGGCGCTCCTGGTCGGCCCCTGCATGACCGCGCCATTGGCGGGTGCATTGCTGTACATCGGACA
GACCGGCAGCGCGGTCTATGGCGGAATGGCATTGTTCGCGCTGGGTTTGGGCATGGGATTGCCCCTGTTGGCCATCGCCG
TGTTCGGTGCCCGGGTCCTACCTCGCCCGGGCGCATGGATGGATCGCGTGCGCGTGGCATTCGGCTACGTCATGGTCGGC
ATGGCCGTGATGATGCTAACGCGCTTCCTGCCCGGCACCGTGGGCCTGGTGCTTTGGGGGGCCTGGGTCTTGTCCGTGGC
GATTGGCCTGATCGCCTGGGGTCAGGCCGTGGCGGCGAAGCATCGGCTGGCATGGACGCTGCGGTCCGGTGCTGTCTTCG
CCGGCTTGTGGTCCGTCCTGATGCTGGTCGGCGCTGCATCCGGGGGCGAATCCGCTTTGCAGCCGTTGGCGCATCTGCGC
GGTGGATCGACTTCGGCCGCATCCGCTGAGGCTGGTGTCGCTTTCGTCCAGGCGAAATCGGTCGAGGACGTGGATGCGCA
TTTGGCCCAGGCGGCTTCGCGCGACCAATGGACCCTGATCGACTTCTACGCCGACTGGTGCGTCAGTTGTCATGTGATCG
AGCGCAACGTATTCGGAGACCCCGCTGTCGCGTCCCGGCTGGCGCGCATGCAGGTGGTGCGGCCGGACGTCACGCGCAAT
GATGCAACCGACCAGGCTCTGCTCAAGCGCTGGGGCGTCATGGGACCGCCCACACTCATTCTGGTTGGCCCGGACGGCAA
GGAACGCCGGGATCTGCGCGTGGTGGGTGAGATCGATGCTCGCACCTTCCTGGATCATCTGGACAAGGCGGGCTCCTGA

Protein sequence :
MAFYRRIVAIFLLCCCMVGSAWANGLLPSWGSSERQFLDVAEVFKLDPAQQQGDSFLIAGHIADGYYVYRHAIKLVDARG
HEISLTLPAGTAKHDEFFGDTEIYKGDALNLRFPVTAAGPLTLHWQGCAEAGICYPPQTVNLALPEVAAGTSTAGNGSTH
ESPTAAPASQGSVAGATEIAEDQAAAQRLAALGPVWGTLLFFGFGLLLAFTPCSLPMIPIVSSMVVGSQAKPRRAFFLSL
SYVVAMAGTYAVVGVAAGMAGANLQATLQSPWLLGAFAALFLVLASSLFGLFELQMPSALVNRVESAGRDRSGGSIPGAA
ALGFLSALLVGPCMTAPLAGALLYIGQTGSAVYGGMALFALGLGMGLPLLAIAVFGARVLPRPGAWMDRVRVAFGYVMVG
MAVMMLTRFLPGTVGLVLWGAWVLSVAIGLIAWGQAVAAKHRLAWTLRSGAVFAGLWSVLMLVGAASGGESALQPLAHLR
GGSTSAASAEAGVAFVQAKSVEDVDAHLAQAASRDQWTLIDFYADWCVSCHVIERNVFGDPAVASRLARMQVVRPDVTRN
DATDQALLKRWGVMGPPTLILVGPDGKERRDLRVVGEIDARTFLDHLDKAGS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
dsbD AAN62102.1 putative thiol:disulfide interchange protein Not tested PAGI-2(C) Protein 0.0 91