Gene Information

Name : Ajs_1347 (Ajs_1347)
Accession : YP_985640.1
Strain : Acidovorax sp. JS42
Genome accession: NC_008782
Putative virulence/resistance : Unknown
Product : TniB family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1416614 - 1417510 bp
Length : 897 bp
Strand : +
Note : PFAM: TniB family protein; KEGG: rme:Rmet_4973 TniB

DNA sequence :
TTGAGCGGCGACTATCCACACTTGCATCCCTCCGCACGCGCATGGGCAGACGAAGACGCGCCGTCGCGGGTACGCCGCAT
CCGCACGGATAGGTGGATCGGCTACGCACGGGCACAGGCCGCGTTGGCGGCAATCGAGGATGTGCTGTCATTCCCAAAGC
GGACCCGGATGCCGAACCTGCTTCTGGTCGGGCCGACGAACAACGGCAAGACCATGATCGTGGAGAAGTTCCGGCGCAGC
CATCCGCTCATCGCCGCGGAGGATGCCGAGGATGGCATCGCCCGTGTGCCGGTGCTGAAGATGCAGATGCCGGCAGGCCC
CGACGAGCGGCGCTTCTTCGGAGCCATCCTCGACCAGTTGGGAATGGACCACTGGCCCAAGGAGCGGGTTGCCGCGCAGC
AAAACCTGGCGGTTCGCCTGATGCGCACGACCGACGTGCGCGTGCTCGTGATCGACGAATTGCATAACGTCCTCTCCGGT
CCGGTGTTGCAGCAGCGGCGTCTGCTCAATCTGCTGCGCTGGCTCGGCAACGAATTGCAGATACCGCTGGTAGGCGTTGG
CACCGCTGAGGCATTGCGGGCCATCCGCAGCGATGACCAGCTTGCCAACCGCTTCGAGCCCGTGGCGTTGCCGCTGTGGG
ACGAAGATGAAGCGTATCGGCGGCTGCTCAGCACGCTGGAGGCGCTGCTGCCCCTGCGCAAGCCGTCCGGGCTGGCGCAG
CCTGCCCTGGCAGGGAAGATCTTTGCCCTGTCCGAAGGCGTGCTGGGTGAGATCGTCTCGATCGTCACACGCGCTGCGGC
CGTCGCGGTCACCTCGGGCGCGGAGGCGATCTCGCCACGCCTGATCGAGAAGTCTGGGTTCATCTCGCCTACTGGCCGCA
GACGTGTGGCCGTGTGA

Protein sequence :
MSGDYPHLHPSARAWADEDAPSRVRRIRTDRWIGYARAQAALAAIEDVLSFPKRTRMPNLLLVGPTNNGKTMIVEKFRRS
HPLIAAEDAEDGIARVPVLKMQMPAGPDERRFFGAILDQLGMDHWPKERVAAQQNLAVRLMRTTDVRVLVIDELHNVLSG
PVLQQRRLLNLLRWLGNELQIPLVGVGTAEALRAIRSDDQLANRFEPVALPLWDEDEAYRRLLSTLEALLPLRKPSGLAQ
PALAGKIFALSEGVLGEIVSIVTRAAAVAVTSGAEAISPRLIEKSGFISPTGRRRVAV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tniBdelta1 YP_006098382.1 transposition protein Not tested Tn2411 Protein 8e-51 51
tniB ACY75526.1 TniB Not tested Tn6060 Protein 7e-51 51
tniB ACY75529.1 TniB Not tested Tn6060 Protein 7e-51 51
tniB delta AET25392.1 TniB delta Not tested PAGI-2(C) Protein 7e-51 51
tniB delta AFG30115.1 TniB delta Not tested PAGI-2 Protein 7e-51 51