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Name : Ajs_1340 (Ajs_1340) Accession : YP_985634.1 Strain : Acidovorax sp. JS42 Genome accession: NC_008782 Putative virulence/resistance : Unknown Product : phage integrase family protein Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0582 EC number : - Position : 1408940 - 1410403 bp Length : 1464 bp Strand : + Note : PFAM: phage integrase family protein; KEGG: xcv:XCV2298 phage-related integrase DNA sequence : ATGGCACTCTCTGATCTGATCGTCCGGCAGGCCAAGACCACCGGCAAACGCTATACCCTCCACGACAACGACTGCCTGAG CCTGATGGTCTCTGCCGCAGGCGGCAAGTCATGGATCTTCCGCTATTCCTGGCTGGGCACGCAAAAGCGCATGTCCCTGG GCAGTTATCCCGCCCTCAGCCTGCGGGAGGCCCGTGCCGAGCGGGACAAGGCCCAAGCCCTGATCGCCAGGGGGATCGAT CCCCGGATCGAGCGTGATCAGCGCCGGCACGCGGCCAGGCTGGCAGGCGAATACACCTTCAAGAACGTCTTCGATGCCTG GGTCGAGCATCGCCGCAAGGAACTCAAGGAAGGCCGTCAAAGCACGCTGTCGCAGATCCTGCGCATCTTCAACAAGGACG TGCTGCCTACCTTGGGAAAGATGTCGATCTACGACATTCGCCGGCCCCAGCTGGTGGGCGTGGTGGCGGCGATCGAGAAG CGCAAGGCGTTCACCACCGCCGAGAAGGTGCGTACCTGGTTCAACCAGATGTTTCGCTATGCCCTAGTCATCGCCGAGGG GCTGGAAGTCAACCCGGCTGCGGACCTGGACGTGGTGGCCGAACCTAAGCCCCCAGTGGCGCACAACCCCTACCTGCACC TGCCCGAGCTGCCCGAGTTCCTTCAGAAGCTCCGGCGCTACAACCCCCGCGGCTGGCAGACCCAGCTTGGCGTCCGGCTG CTGTTCCTGACGGGGGTGCGCACGGGCGAACTGCGGCTGGCCGAGCCTGAGCAATTCGACCTCGACCGCGGTTTGTGGAT CATCCCGCCCCAGGTCGTCAAGCAGCTCCAGGACGAAATGCGCAAGGCCGGCAAGCGGCCGCAGGACGTGCCGCCTTACA TCGTGCCCCTGTCCCTGCAGGCCATCGAGATCGTCCGCTATCTCCTGGGCGTGATGCGGCCGGCGCAGAAGTACCTGCTG TCGCACCGCAGCGAACTCAAGAAGCGCATCAGCGAGAACACCCTCAACAAGGCCGTGCAGCTCATGGGCTACGAGGGGCG CCTGACCGGCCACGGCATCCGCGGCACCATCTCGACCGCACTCAACGAGATCGGATACCCGAAGATTTGGGTGGACGCGC AGCTTTCGCACTCCGATCCAAACAAGGTCAGCTCGGCCTACAACCACGCCAAGTACGTGGAGCCGCGCCGCCGGATGATG CAGGACTGGGCCGATCGCCTGGACCTGCTCGAACAGGGCGAAGTGGAAGCTGCGAGCGCGCACCTGACCATTCGTATCGA CGGGGTGCCGGTGATGGCAGAAGCGGAGGATGTGGTGAGTGCGGCCCCCACGGTGGCCGAGCCTGTTGCCTCCGGTGTCT CGCCCGTGGTGGCCACGCCCATCGTCGTGACCCCCGATGGCCAGTCCAAATTCCCCCACCTGTGGCCACCCCAAATTCCC CAGGCAAGACCGGTTGGATTATGA Protein sequence : MALSDLIVRQAKTTGKRYTLHDNDCLSLMVSAAGGKSWIFRYSWLGTQKRMSLGSYPALSLREARAERDKAQALIARGID PRIERDQRRHAARLAGEYTFKNVFDAWVEHRRKELKEGRQSTLSQILRIFNKDVLPTLGKMSIYDIRRPQLVGVVAAIEK RKAFTTAEKVRTWFNQMFRYALVIAEGLEVNPAADLDVVAEPKPPVAHNPYLHLPELPEFLQKLRRYNPRGWQTQLGVRL LFLTGVRTGELRLAEPEQFDLDRGLWIIPPQVVKQLQDEMRKAGKRPQDVPPYIVPLSLQAIEIVRYLLGVMRPAQKYLL SHRSELKKRISENTLNKAVQLMGYEGRLTGHGIRGTISTALNEIGYPKIWVDAQLSHSDPNKVSSAYNHAKYVEPRRRMM QDWADRLDLLEQGEVEAASAHLTIRIDGVPVMAEAEDVVSAAPTVAEPVASGVSPVVATPIVVTPDGQSKFPHLWPPQIP QARPVGL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AFG30104.1 | Int | Not tested | PAGI-2 | Protein | 0.0 | 91 |
| int | AAN62094.1 | putative integrase | Not tested | PAGI-2(C) | Protein | 0.0 | 78 |
| int | AAN62223.1 | putative integrase | Not tested | PAGI-3(SG) | Protein | 4e-156 | 70 |
