Gene Information

Name : Ajs_1336 (Ajs_1336)
Accession : YP_985631.1
Strain : Acidovorax sp. JS42
Genome accession: NC_008782
Putative virulence/resistance : Resistance
Product : MerR family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG0789
EC number : -
Position : 1404762 - 1405202 bp
Length : 441 bp
Strand : +
Note : TIGRFAM: Cd(II)/Pb(II)-responsive transcriptional regulator; PFAM: regulatory protein, MerR; KEGG: dar:Daro_2633 Cd(II)/Pb(II)-responsive transcriptional regulator

DNA sequence : 
ATGCGCATCGGCGAACTGGCCCAGGCCAGCGGAACGCCCATCGAGACGATCCGCTTCTATGAACGAGAGGGGCTGCTGCC
GGCCGCCGCGCGCACGGAGGGCAACTACTGCATCTACACCCCGCAGCATGCGGATCGGCTGGGGTTCATCCGCCAGTGCC
GCAGCCTGGACATGACGCTTGACGAGGTGCGGGTGCTGCTGCGTTTCAAGGACCAACCCTTGGCCGATTGCGGCGAGGTG
AACAGCCTGCTGGACGAGCACATCGGCCATGTGGCCGAGCGGATCAAGGCCCTGCGCGCCCTTGAGAAGGAGCTGAGGGC
GCTGCGGGCGGCCTGCCCCGTGCCTCATGCCTCTGCCGACTGCGGCATCCTCCAGGGCATCGATCACGCAGGTGCGAAAC
CTGCGGCGGCTTCCAAGCGCCATGTGCGCGGCGCTCACTGA

Protein sequence : 
MRIGELAQASGTPIETIRFYEREGLLPAAARTEGNYCIYTPQHADRLGFIRQCRSLDMTLDEVRVLLRFKDQPLADCGEV
NSLLDEHIGHVAERIKALRALEKELRALRAACPVPHASADCGILQGIDHAGAKPAAASKRHVRGAH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C98 AAN62191.1 putative transcriptional regulator Not tested PAGI-2(C) Protein 7e-26 52
ACICU_00234 YP_001844893.1 transcriptional regulator Not tested AbaR20 Protein 2e-28 52
cadR ADZ05769.1 MerR family transcriptional regulator Not tested AbaR11 Protein 2e-28 52
cadR ACS32041.1 MerR family transcriptional regulator Not tested AbaR5 Protein 3e-28 52
cadR ACN81029.1 MerR family transcriptional regulator Not tested AbaR5 Protein 2e-28 52
pbrR CAJ77021.1 transcription regulator Not tested AbaR1 Protein 2e-28 52
pbrR CAJ77094.1 Transcriptional regulator Not tested AbaR1 Protein 1e-28 52
cadR AGK36653.1 MerR family transcriptional regulator Not tested AbaR26 Protein 1e-28 52

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ajs_1336 YP_985631.1 MerR family transcriptional regulator BAC0301 Protein 3e-32 60
Ajs_1336 YP_985631.1 MerR family transcriptional regulator BAC0058 Protein 8e-31 53