|
Name : Ajs_1335 (Ajs_1335) Accession : YP_985630.1 Strain : Acidovorax sp. JS42 Genome accession: NC_008782 Putative virulence/resistance : Resistance Product : heavy metal translocating P-type ATPase Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG2217 EC number : - Position : 1402423 - 1404684 bp Length : 2262 bp Strand : - Note : TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 DNA sequence : ATGGCCCACGATCACCCCCACGACATCAAGCCGGATCCGGCCGGCGCACTGCAACCGGCTGGCTGCGGCGCCTGCTGCGG CGCTTCCGACCACGCACCTGCTGCCTCTGCCTCGGTCCCCCTGGGTGGTGGCCAGCGCTTCCGCATTCCGGCGATGGACT GCGCCAGCGAGGAGTCCGAGATCCGTCGCGCTGTCGAGGGCATCCCCGGCGTCCTGGGGCTACGCTTCCAGCTGGGCGAG CGCAGCCTGCGCATAGCCGGCGAGCCGCAGGCAGCGCTGGCGGCAGTGGAAGCCATCCGGAACTCCGGATTCGAGGTTCA CGCCTGGCCCGACGCGACGGAGTCGTCCAACGCCGGTGATGGATCGGATCACGGCCACGACGCAGCAACCGGGTCCGGCC TGCCCCGCCTGCTGGCTGCCCTCGCTCTTGCGACGGCTGCCGAGGCCCTGTCCTTCCTGGCACCGGACGCGCCCTGGTCC AAGTGGGCTGGCCTGGCCGTTGCAGCCGCGGCCATCGGGCTGGCCGGCTTCGGCACGTTCCGCAAGGGCCTGTCCGCCCT GCGGCACGGCCGCCTGAACATCAATGCACTGATGTCAGTGGCGGTCGCGGGAGCCTTCGTGATCGGCCAGTGGCCTGAGG CGGCCATGGTCATGGCGCTGTACGCGATCGCCGAACTGATCGAGGCGCGGGCCGTCGACCGCGCGCGCAATGCAATCAGC GGCCTGCTGGCGCTGTCGCCCGACACCGCCGACCTGCGGCAGCCCGACGGCACCTGGAGATCCGCGCCCGTCGGCAGCGT ACCTATCGGCGCCACGGTCCGGGTCAAGCCGGGCGAACGCGTGGCCATGGATGCCATCGTCACCGACGGCAGCACCGCCG TGGACCAGGCGCCCGTCACCGGCGAGAGCCTGCCGGTCGACAAGGGGCCGGGCGATGCGGTCTTCGCCGGCACCATCAAC CAGACCGGCACCATCGAGTGCCGTGTCACCGCCGCGGCGTCGCAATCGACGCTGGCCCGCATCATCCACGCGGTCGAACA GGCCCAGGGCAGCCGTGCGCCCACGCAGCGCTTCGTCGACCGGTTCGCGGCCGTGTACACACCGGCGGTGTTCGTGCTGG CACTGGCCGTTGCCATCGCCGGCCCGTGGCTCTTCGGCTGGACGGTGCTGGCCGCGGTCTACAAGGCGCTGGTGCTGCTG GTCATCGCCTGCCCGTGCGCCCTCGTGATCTCGACGCCCGTCACCGTCGTCAGCGGGCTGGCGTCGGCGGCCAGGCGGGG CATTCTGATCAAGGGCGGCGTCCACCTCGAACAGGCGCGCCTGCTCAAGGCGGTCGCGCTCGACAAGACCGGCACCATCA CCGAAGGCAGGCCGCGCCTCGTCGAGTGGGAGATGCTGTCCACCAGCCTGCCCAAGCCGCAGGCCGAACACATCGCAGCC GCGCTGGCGGCGCACTCGGACCACCCGGTGTCGCGCGCCATCGCCGCGGGGCTGACGCCGAACAGCGTCGAGGCCCGCAA CTTTGCCGCGCTGTCCGGGCGCGGCATCGAAGCCGACATCGGCGGCCAGCGCTACGTGCTGGGCAACCACCGCCTGATCG AGGAGCGCGGCCAGTGCTCCGCCGAGATCGAGGCCGTGCTCCACCGTCACGAGGAAGCGGGCCGCACGGTCAGCCTGCTG GCCACCGCGTCCGGGGTGCTGGCGCTCTTCGCGGTGGCCGACACGATCAAGCCCTCGTCGGCCGCCGCCATCGGCGAGCT GAAGGCGATGGGCATCACGCCGGTGATGCTGACCGGTGACAACCAGGCCACCGCCGAGGCCATCGGCCGCGAGGCCGGTA TGACGGACATCCGCGGCAACCTGCTGCCCGAGGACAAGCTCGCCGCGATCCAGGCCATGCAGAAGCAGTATGGGGCGACG GCGATGACCGGCGACGGCATCAACGACGCACCCGCGCTGGCGCAGGCCGACATCGGCGTGGCGATGGGCGCTGCCGGCAC CGACATCGCGATGGAAGCGGCCGACGTGGTGGTGATGAACGACGATCTGCGGCGCATTGCCGAGACGGTGCGCCTGTCGC AACGCACGCACGCCGTGCTGTGGCAAAACATCGCGCTGGCTCTCGGCATCAAGGCCGTCTTCCTGGTGCTCGCGCTGTTC GACAACGCCAGCATGTGGATGGCCGTGTTCGCCGACATGGGGGCCAGCCTGTTGGTGGTCTTCAACGGCCTGCGCCTGTT GCGAAACCCCGAACGAAGCTGA Protein sequence : MAHDHPHDIKPDPAGALQPAGCGACCGASDHAPAASASVPLGGGQRFRIPAMDCASEESEIRRAVEGIPGVLGLRFQLGE RSLRIAGEPQAALAAVEAIRNSGFEVHAWPDATESSNAGDGSDHGHDAATGSGLPRLLAALALATAAEALSFLAPDAPWS KWAGLAVAAAAIGLAGFGTFRKGLSALRHGRLNINALMSVAVAGAFVIGQWPEAAMVMALYAIAELIEARAVDRARNAIS GLLALSPDTADLRQPDGTWRSAPVGSVPIGATVRVKPGERVAMDAIVTDGSTAVDQAPVTGESLPVDKGPGDAVFAGTIN QTGTIECRVTAAASQSTLARIIHAVEQAQGSRAPTQRFVDRFAAVYTPAVFVLALAVAIAGPWLFGWTVLAAVYKALVLL VIACPCALVISTPVTVVSGLASAARRGILIKGGVHLEQARLLKAVALDKTGTITEGRPRLVEWEMLSTSLPKPQAEHIAA ALAAHSDHPVSRAIAAGLTPNSVEARNFAALSGRGIEADIGGQRYVLGNHRLIEERGQCSAEIEAVLHRHEEAGRTVSLL ATASGVLALFAVADTIKPSSAAAIGELKAMGITPVMLTGDNQATAEAIGREAGMTDIRGNLLPEDKLAAIQAMQKQYGAT AMTGDGINDAPALAQADIGVAMGAAGTDIAMEAADVVVMNDDLRRIAETVRLSQRTHAVLWQNIALALGIKAVFLVLALF DNASMWMAVFADMGASLLVVFNGLRLLRNPERS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cadA | BAC57487.1 | Probable cadmium-transporting ATPase (Cadmium efflux ATPase) | Not tested | Type-IIIinv SCCmec | Protein | 7e-109 | 42 |
| unnamed | BAB47609.1 | cadmium resistance protein B | Not tested | Type-III SCCmec | Protein | 6e-109 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Ajs_1335 | YP_985630.1 | heavy metal translocating P-type ATPase | BAC0298 | Protein | 3e-140 | 61 |
