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Name : Ajs_1276 (Ajs_1276) Accession : YP_985576.1 Strain : Acidovorax sp. JS42 Genome accession: NC_008782 Putative virulence/resistance : Unknown Product : lytic transglycosylase catalytic subunit Function : - COG functional category : - COG ID : - EC number : - Position : 1352192 - 1352782 bp Length : 591 bp Strand : - Note : PFAM: Lytic transglycosylase, catalytic; KEGG: xcv:XCV2379 putative lytic transglycosylase precursor DNA sequence : ATGGCAGCGCCAGCCGTAGCCATGCCCCTGCGCGCACTGGTGCTCACTGCCGGCCTGTATGCCGTTGCCGCCCTGGCCCA GGAGGTTCCGCCACCGGCCTACCAGCTTGCCGCCCAGCGAGCAGGCATCCCTTCGACGGTGCTCTACGCCGTGGCCTTGC AGGAGAGCGGCATCCGCCGCAACGGTCGCACCGTCCCGTGGCCGTGGTCCCTCAACGTCGCCGGCCAGTCGCGCCGCTTT GCCACGCGCGCCGATGCCTGCGCAGGTCTCCAGCAGGCGATGCGCTCCACGCCGCACACGCGCATCGACGCGGGCCTGGG CCAGATCAACCTCGGCTATCACCAGCGGCGCTACGCCAATGCGTGCGACTTGCTCGACCCGTACCGCAACCTCGCCACCG CTGCCGAGATCCTGAAGGAACAGCACGCCCCCGGCGAGGACTGGTTGCTGGCGATCGGCCGCTACCACCGCCCCGCGGGC GGTGAACCCGCTGCCCGCTATCGCCGTAGCGTGTCCCGCCACCTTGCCCGTGTGCAGGGCGCGCGCCCAGCCGCCGCGGC CCTCGCCGCGCGCCAGGAGACCTCCCCATGA Protein sequence : MAAPAVAMPLRALVLTAGLYAVAALAQEVPPPAYQLAAQRAGIPSTVLYAVALQESGIRRNGRTVPWPWSLNVAGQSRRF ATRADACAGLQQAMRSTPHTRIDAGLGQINLGYHQRRYANACDLLDPYRNLATAAEILKEQHAPGEDWLLAIGRYHRPAG GEPAARYRRSVSRHLARVQGARPAAAALAARQETSP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ORF C67 | AAN62161.1 | conserved hypothetical protein | Not tested | PAGI-2(C) | Protein | 5e-76 | 95 |
| ORF SG70 | AAN62292.1 | conserved hypothetical protein | Not tested | PAGI-3(SG) | Protein | 2e-55 | 75 |
| pph70 | CAI36111.1 | soluble lytic murein transglycosylase | Not tested | PPHGI-1 | Protein | 4e-41 | 57 |
| unnamed | ABR13378.1 | hypothetical protein | Not tested | PAGI-5 | Protein | 3e-30 | 52 |
| EXA50 | ABD94659.1 | conserved hypothetical protein | Not tested | ExoU island A | Protein | 2e-33 | 51 |
| RL050 | AAP84175.1 | conserved hypothetical protein | Not tested | PAPI-1 | Protein | 9e-31 | 49 |
| YE3494A | YP_001007653.1 | hypothetical protein | Not tested | YAPI | Protein | 2e-20 | 42 |
| PMI2591 | YP_002152310.1 | lytic transglycosylase | Not tested | Not named | Protein | 5e-23 | 42 |
