Gene Information

Name : Ajs_1258 (Ajs_1258)
Accession : YP_985558.1
Strain : Acidovorax sp. JS42
Genome accession: NC_008782
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1336808 - 1338238 bp
Length : 1431 bp
Strand : -
Note : KEGG: rme:Rmet_2351 putative secreted protein

DNA sequence :
ATGCGCAGTAACGGCCTGCTCAAGTGGCTGATGATCCCTGTCGCCATCCTGGTGCTGTTCGTCGGTATCCGGCTGTTCTC
GGGTGGAGGCAGCACGGCGCCACCCGCGGAGGACAACGGCGCCCAGCTCACGCCCGATGAAATGAAGGCTCTCGGCATCG
AGGGCGATACCCCGCGCGACACCGTGGCGACCTTGGTGGCGCAGGTGAAGCAGTTGCGCACCGAGCTTCAGACCGCGCTC
TCGGACAACAAGTCCCAGCGTGAAGAGAACCAGCGGCTGCGTCAGCGCGAAAACTCCATCGACCAGCGCATCAACTCGGC
GCTCGAATCCGAGCGGTCCAACCTGCGCCGCGACCAGGAGCAGGCGGCCAGCGCGCGCCAGCAGACCGAAGGGCTGCTCG
CCGACCTGCAGCGGCGCCTGGACAGCATCGGCGGGCGCGGCGGCGGCCATGCGGACCTGCCCGTGGGCTTGGGGCTGCAG
GGCGGCGACGAGGCCGGCATGGAGGGCGGCGTGCGGTGGGTCGAGCCGGACGACGCAAAGCCCGCCGAGGGGCGCAACGG
GGGGCGTGGCGCGAGCGGCGGCATGAGCTTCCCCACGAGCTTCGGCCCGGCGCAGAGCACGCTCGAAACCACCGCGGAAA
CCGTGGCCAACGCGGGCGCCCGCGCCGCCGGGGTCAAGAGTGCCAAGCCGGTCTATACCGTGCCGACCAACTCGACGCTG
ATGGGATCGGTGGCGATGACGGCCCTGATCGGCCGCGTGCCGATCGACGGCACGGTCAACGATCCCTATCCGTTCAAAGT
CCTGGTCGGGCCGGACAACCTGACCGCCAATGGCATCGACATTCCCGACGTGGCCGGCGCCGTGTTCAGCGGCACCGCCT
CGGGCGACTGGACGCTGTCGTGCGTGCGCGGTCAGGTGCGCAGCATCACGTTCGTCTTCCACGACGGCACGATCCGCACG
ATCCCCGAAGACCGCGAGGGCAACCAGCAGGACAACCAACAGCAGAACTCTCAAAGTGGGGGCTTGGGCTGGATCAGCGA
TCCCCACGGCATCCCGTGCGTCAGCGGCGAGCGGCGCAGCAACGCCCAGCAATACCTCGGCTCGCAGGCCCTGATCACCG
CGGCCGGTGCCGGTGTGGCCTCGCTCATCGAGAGCGACAGCGGCCGCATGTCCTATGTCGGCTCGGACGGCTCCATCGGC
ACCGTGGGCATCACCGGCCAGGAAGCGGTCGGCCAGATTCTGGCGGGCGGCGTGCGGGACATGTCGGCCTGGGTCAACAA
GTTGTACGGCCAGGCATTCGCCGCCGTCTATGTTCAGCCCGGCGCCAAGGTGGCCGTCCACCTCGAAAAGCCGCTCGCCA
TCGACTTCGATCCCGAAGGCCGCAAGGTCGATCACCGCGCAGGAAAAAGCCATGCACTCGAACTTGACTAA

Protein sequence :
MRSNGLLKWLMIPVAILVLFVGIRLFSGGGSTAPPAEDNGAQLTPDEMKALGIEGDTPRDTVATLVAQVKQLRTELQTAL
SDNKSQREENQRLRQRENSIDQRINSALESERSNLRRDQEQAASARQQTEGLLADLQRRLDSIGGRGGGHADLPVGLGLQ
GGDEAGMEGGVRWVEPDDAKPAEGRNGGRGASGGMSFPTSFGPAQSTLETTAETVANAGARAAGVKSAKPVYTVPTNSTL
MGSVAMTALIGRVPIDGTVNDPYPFKVLVGPDNLTANGIDIPDVAGAVFSGTASGDWTLSCVRGQVRSITFVFHDGTIRT
IPEDREGNQQDNQQQNSQSGGLGWISDPHGIPCVSGERRSNAQQYLGSQALITAAGAGVASLIESDSGRMSYVGSDGSIG
TVGITGQEAVGQILAGGVRDMSAWVNKLYGQAFAAVYVQPGAKVAVHLEKPLAIDFDPEGRKVDHRAGKSHALELD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C49 AAN62143.1 hypothetical protein Not tested PAGI-2(C) Protein 0.0 98
ORF SG59 AAN62281.1 hypothetical protein Not tested PAGI-3(SG) Protein 5e-143 71
pph82 CAI36123.1 hypothetical protein Not tested PPHGI-1 Protein 1e-103 49
unnamed ABR13364.1 hypothetical protein Not tested PAGI-5 Protein 1e-101 47
EXA35 ABD94644.1 conserved hypothetical protein Not tested ExoU island A Protein 1e-101 47
RL024 AAP84151.1 conserved hypothetical protein Not tested PAPI-1 Protein 4e-97 47
PMI2579 YP_002152298.1 hypothetical protein Not tested Not named Protein 6e-78 42
YE3484 YP_001007643.1 hypothetical protein Not tested YAPI Protein 3e-70 42
YpsIP31758_3707 YP_001402661.1 hypothetical protein Not tested YAPI Protein 2e-76 41
api37 CAF28511.1 putative exported protein Not tested YAPI Protein 2e-77 41