Gene Information

Name : Ajs_1251 (Ajs_1251)
Accession : YP_985551.1
Strain : Acidovorax sp. JS42
Genome accession: NC_008782
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1329066 - 1330460 bp
Length : 1395 bp
Strand : -
Note : KEGG: rme:Rmet_2358 hypothetical protein

DNA sequence :
ATGAAGCGTCCTGAACCGATGAACCTTTCCGCCAAGGCGTGCTACTTGCTGCGCCCGACGGCGCTGGCCGGCACGCTCGC
TCTGGTCTGCGGCCTGGCGTGGGCGCAGGTCGGATACCAGAACAGCGGCCCCGTCATTGGCGATGACGTCATGTACTCGA
TCGGAGGCGGCAGCGCGGTGTCCATGGGCCGCGCGGCTGGCATGCGCTCCATCGGGGTCGGCTTGGGGTGGAACAGCAAC
CTGATCTGCGGCGACATGAGCATCCAGACCACGCTGCGCAACCAGCTCAACGGCATCACGAACGGCTTCCAGCAGATCAT
GAGCAACGTGATCCAGAGCGCCACCAGCGCGGTGGCGTCCCTGCCGGCGCTGATCATTCAGCGCGCCGATCCCGGCCTGT
ACAACCTGCTGACCAACGGCGTGCTGCAGGCGCGGCTGGACTTCGACCGCTCCAAGCTGACGTGCCGCGCGATGGCCGAG
AAGATGGCCGAGACGGCGGGCGGCCAGCTTGGCTGGAGCCAGATGGCCGAAGGCATGGCCCTGCGTGACGCGGTTGGCAG
CAACGATGCCGTTTCGGCCGTCGAGCAGGCTGAGACGCGCCGCGGCAACGACGGCGTTCCCTGGGTGGGCGGCAGCAATG
CCGGTGGCGCAGGCCAGTCCGCCATTCGGGTGGTCGGCGACGTCACCCGCGCGGGCTACAACCTGGTCAACGGGCGCGGC
GTGACGGACACATCCTCCATCGCGCTCGCCAGTTGCGCGAGCCTGTCCTGCCAGACCTGGACGTCGCCGCAGCAGGCGAC
CGAATGGGCCACCCGGGTCCTCGGGGAACAGGTGCAGCGCACGTGCGATTCCTGCACCAAGACCGAGACGGTGCCCGGCG
TCGGGCTGACGCCGCTGATCCAGGAGGAGTACGAAGCCAAACTGGAAGTCTTGCAGGAACTGGTTTCCGGCGTGCGCAAC
ACCACCTTCGAGAACTTGCGCGAGGCCGGCAGCACGTCGCTGCCGATCACGCGCGGCGTCATCGAGGCGCTGCGCGACGA
GCCGGACCAGGACCTGCTGGCGCGGCGCCTTGCGTCCGAGGTGGCGCTGTCGTCGGTGCTGGAGAAGGCCTTGTTGCTCC
AGCGCACGCTGCTCACGGGAAAGAAGGAGCCCAACGTGGCGGCCAACGAGTTGGCGGTCGAGGCTGTGAACCACGAGAGC
GACACGCTCGACCGGGAGATCCGCAACCTGAAAACGGAGCTGGAGCTGCGCCGCGAGCTGGCGAACAACTCGCCGATGGC
GATCATCCAGCGCCATGGTACGCGCGCGGCCGGCTCGCGCGGCATCTACGAGGGCGATCCGGTGCCCGACCGCCTCGACC
AGTTGCAGAAGGGCAATCCGGGAGTCAGGCCATGA

Protein sequence :
MKRPEPMNLSAKACYLLRPTALAGTLALVCGLAWAQVGYQNSGPVIGDDVMYSIGGGSAVSMGRAAGMRSIGVGLGWNSN
LICGDMSIQTTLRNQLNGITNGFQQIMSNVIQSATSAVASLPALIIQRADPGLYNLLTNGVLQARLDFDRSKLTCRAMAE
KMAETAGGQLGWSQMAEGMALRDAVGSNDAVSAVEQAETRRGNDGVPWVGGSNAGGAGQSAIRVVGDVTRAGYNLVNGRG
VTDTSSIALASCASLSCQTWTSPQQATEWATRVLGEQVQRTCDSCTKTETVPGVGLTPLIQEEYEAKLEVLQELVSGVRN
TTFENLREAGSTSLPITRGVIEALRDEPDQDLLARRLASEVALSSVLEKALLLQRTLLTGKKEPNVAANELAVEAVNHES
DTLDREIRNLKTELELRRELANNSPMAIIQRHGTRAAGSRGIYEGDPVPDRLDQLQKGNPGVRP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C42 AAN62135.1 hypothetical protein Not tested PAGI-2(C) Protein 0.0 99
ORF SG50 AAN62272.1 hypothetical protein Not tested PAGI-3(SG) Protein 4e-138 76
pph90 CAI36131.1 hypothetical protein Not tested PPHGI-1 Protein 6e-122 65
unnamed ABR13356.1 hypothetical protein Not tested PAGI-5 Protein 2e-111 64
EXA19 ABD94628.1 conserved hypothetical protein Not tested ExoU island A Protein 8e-113 63
RL016 AAP84143.1 putative pathogenesis-related protein Not tested PAPI-1 Protein 7e-113 62
unnamed AAX39459.1 unknown Not tested Hrp PAI Protein 2e-63 43
STY4577 NP_458662.1 hypothetical protein Not tested SPI-7 Protein 5e-66 41
t4274 NP_807872.1 hypothetical protein Not tested SPI-7 Protein 5e-66 41
YpsIP31758_3700 YP_001402654.1 hypothetical protein Not tested YAPI Protein 8e-64 41
api55 CAF28529.1 putative exported protein Not tested YAPI Protein 4e-64 41