Gene Information

Name : Ajs_1249 (Ajs_1249)
Accession : YP_985549.1
Strain : Acidovorax sp. JS42
Genome accession: NC_008782
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1327178 - 1328695 bp
Length : 1518 bp
Strand : -
Note : KEGG: bxe:Bxe_A1177 hypothetical protein

DNA sequence :
ATGACGCTTTTCACGACCGACTACCTGGAGTACTACCTGACGCTGGTGTCCTGGATCGTCAACAACGGCATCTGGGCGGT
GCTGGTATCCAGCGGGGTATTCGCGCTGCCTTTCGTCGCCATCATCGTGCAGGAGTGGTTGAAGGCCCGTGCGGAAGGTG
CCGACGAGGGCAATAAAGGCGTGCTGAGCGCCGCCCGCATCGAGAACCGGGTCTTCGTCGCCATCGTGGTGGTGATGTTC
GCCGGCATTCCGTTCATCGACGTGGACCTGAACACCATCCAGTACGACAGCTCGCGCTCGGCCCAGTGCCAGGTCAGCGT
GCCGCAGCCCACGGATACCGGCTGGTCGCAGTCCTTCAGCACCATCAACAACCAGTCGGCGAAGGTGCCCGTCTGGTGGG
CGTTCATGCATGCACTCTCGCGCGCCGTCACGAGCGCCTCGGTGGCGGCGATCCCGTGTGGCACGGACCTGCGGCAGATG
CGCATGGAGATCGACGCCACGCGCATCGATGACCCGGTGCTGGCTCAGGAAGTAGCGGATTTCTCGCGGGATTGCTATGG
GCCTGCACGGGCCAAATTGTTCATGCAGCGCCCTCAGCTCGATGAGCAGCAGATGCACGACGTGACCTGGATCGGATCGC
GGTTCTTCACCGACACGAACGGCTACTACGACACGTACCGTTCCAGCACGCCGCGCGATGACTGGCCCTATGACAGCAAC
CGCGACGCCGGGCTGGCTCAGGTATCCAGTGGCGGTGGCTACCCGACCTGCAGGCAATGGTGGGCTGATGGCAGCAATGG
CCTGCGGGCACGCCTGCTGGGACAGGTGGACCCGAGCCTGCTCAATCGGCTGGCGGGCTGGGCCGGGTTCCTGAGCCGGG
CCGAGGTGGACGACTCGGTGATCCGCACCATCGCGTCGCCGAGGCAGCAGAAGTTGAACCAGGGCAGCGTCTATACGGAC
TACGGCGGCCAGATCGACAAGACCTTGCCGAACATCGTGACGCGGGCCACGGGAGACGTTGGGATGGCAGTCGGCGCGCT
TGCGGCATTTCCCGCCATGGACGTTGTGAGACAGGCCCTGCCCATGGTGCTCGCCTTGCTCAAGATGGCGCTGGTCATCT
GCATCCCGCTCGTGCTGGTTGTGGGCACCTATGACCTGAAGACGGTCGTCACGGTCAGCGTCGTGCAGTTCGCGCTGTTC
TTCACGGACTTCTGGTTTCAGCTTGCGCGCTGGATCGATTCGACGATCCTGGACGCACTTTATGGCTGGGGGTTCGGCTG
GAACCGGCCGCACACCAATTTCGACCCGTTGGTAGGACTGAACAACGCCTTCGGTGACATGCTCCTGATGTTCGTCACGG
GCACGATGTTTCTGGTCCTGCCGACGTTTTGGGTCGCTGCCTTGGGGTGGGTCGGAGTTAAGGCTGGGGTGATTGCTCAG
AACCTTGCTGTCGGCTCCAAGGAAGCGCGTGATAGCGCCGGGTCAGGTGCAAACAAGGTAGCCGGCAAGGTTCTGTGA

Protein sequence :
MTLFTTDYLEYYLTLVSWIVNNGIWAVLVSSGVFALPFVAIIVQEWLKARAEGADEGNKGVLSAARIENRVFVAIVVVMF
AGIPFIDVDLNTIQYDSSRSAQCQVSVPQPTDTGWSQSFSTINNQSAKVPVWWAFMHALSRAVTSASVAAIPCGTDLRQM
RMEIDATRIDDPVLAQEVADFSRDCYGPARAKLFMQRPQLDEQQMHDVTWIGSRFFTDTNGYYDTYRSSTPRDDWPYDSN
RDAGLAQVSSGGGYPTCRQWWADGSNGLRARLLGQVDPSLLNRLAGWAGFLSRAEVDDSVIRTIASPRQQKLNQGSVYTD
YGGQIDKTLPNIVTRATGDVGMAVGALAAFPAMDVVRQALPMVLALLKMALVICIPLVLVVGTYDLKTVVTVSVVQFALF
FTDFWFQLARWIDSTILDALYGWGFGWNRPHTNFDPLVGLNNAFGDMLLMFVTGTMFLVLPTFWVAALGWVGVKAGVIAQ
NLAVGSKEARDSAGSGANKVAGKVL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C40 AAN62133.1 hypothetical protein Not tested PAGI-2(C) Protein 0.0 91
ORF SG48 AAN62270.1 hypothetical protein Not tested PAGI-3(SG) Protein 0.0 77
pph92 CAI36133.1 hypothetical protein Not tested PPHGI-1 Protein 1e-159 61
unnamed ABR13354.1 hypothetical protein Not tested PAGI-5 Protein 1e-148 58
EXA17 ABD94626.1 conserved hypothetical protein Not tested ExoU island A Protein 2e-149 57
RL014 AAP84141.1 conserved hypothetical protein Not tested PAPI-1 Protein 2e-148 57
STY4579 NP_458664.1 putative membrane protein Not tested SPI-7 Protein 5e-100 43
t4276 NP_807874.1 hypothetical protein Not tested SPI-7 Protein 5e-100 43
PMI2570 YP_002152289.1 hypothetical protein Not tested Not named Protein 2e-93 43