Gene Information

Name : Ajs_1245 (Ajs_1245)
Accession : YP_985545.1
Strain : Acidovorax sp. JS42
Genome accession: NC_008782
Putative virulence/resistance : Unknown
Product : relaxase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1323801 - 1325684 bp
Length : 1884 bp
Strand : -
Note : PFAM: protein of unknown function DUF1528; Relaxase; KEGG: xfa:XF1753 hypothetical protein

DNA sequence :
ATGCTTTCTCTGTTCCAGCGAAAACGGCCCGCGGTCGCTGCCGCTCCGACGCCACCATCGGTCACCGACCTCCCGAAAGG
GTTGATGCGGCCCGAGTCGGCCGCATCGCTGCTGGCCACCCCGCGCCGGCAGAAGCTGCTGGAGCACATCTGGCAGCGCA
CGTCGCTCTCACGTAAGCAGTTCGCCACCTTGTACCGGGCGCCCCTGGAGCGCTACGCCGAGCTGGTCCAGGCCTTCCCG
GCCTCCGAGGCGCATCACCATGCCTACCCGGGCGGCATGCTGGACCACGGCCTGGAAATCGTCGCCTACAGCCTGAAACT
GCGGCAGTCCCATCTGCTGCCGATTGGCGCCAGTCCCGAAGACCAGGCGGCGCAGTCTGAAGCCTGGACTGCCGCGGTCG
CCTATGCCGCGCTGCTGCACGACATCGGCAAGATCGCCGTCGATCTGCACGTCGAACTGGCCGACGGCTCGCTGTGGCAC
CCCTGGCACGGCCCGCTGCACCAGCCATACCGCTTCCGCTACCGCGACGATCGGGAATATCGGCTTCACAGCGCCGCGAC
AGGTTTGCTCTACCGCCAACTCCTCGACCGTGATGCCCTGGACTGGCTCAGTGGCTATCCCGACCTGTGGGGACCGCTGC
TCTACGTCCTGGCCGGCCAGTACGAGCACGCCGGCGTGCTGGGCGAACTTGTCGTGCAGGCCGACCGGGCTTCGGTGGCC
CAGGAACTGGGCGGCGATCCGGCCCGCGCCATGGCTGCGCCCAAGCACGCGCTGCAGCGCAAGCTGCTCGACGGGTTGCG
CTACCTGCTCAAGGAACAGTTGAAACTGAACCAGCCGGAAGCCTCCGATGGCTGGCTCACCGAGGATGCCCTGTGGCTGG
TGAGCAAGACAGTCTCGGACAAGCTGCGTGCGCACCTGCTGTCTCAGGGTATCGACGGCATTCCAGCGAACAACACCGCG
GTGTTCAACGTCCTGCAGGATCACGGCATGTTGCAGCCGACGTCCGACGGCAAGGCGGTCTGGCGCGCGACTGTGACCAG
CACGACTGGCTGGTCCCACTCGTTCACCTTGTTGCGTCTAACGCCCACGCTGATCTGGGAGCCGCGTGAGCGGCCGGCAC
CGTTCCCCGGCACGGTGGCGATCGACGTGGCGCCCACGGACAAAGAGGCTGACGTGTTCACCACCATTTCGACGGCCGGC
CCGCTGGCCGCCCCGGAAGGCCAAGAAGATCCACCAGGGGAAGGAGGTCGTTCATCTTCAGCTCCTTCGTCCAAGTTCCA
AACCTTGCCGGACGTGATGGAAGACATGCTTTCGATGGTGGGTATCGGCGACTTACCCGCGATCGGGCAGGACGCGGCAG
TGCTCTCAGAGCAGGTGCCTGCCGCACGTCCCGAAATACCAACCTTGCCCGCGTCACTGCCGTCGTCGCCTGCGCCAGCG
CCCTCGATAGCGCATCCATCCGGGGAGCACTTCATGGCGTGGCTGAAACAGGGCATCTTGTCCCGCCGACTCATCATCAA
CGACGCAAAAGCGCTCGTGCATACGGTGAGCGGCACGACCTACCTGGTCAGTCCCGGGGTCTTCCAGCGCTATGCGCAAG
AGCACCCGCAAGTCGGCGCGCAGGCTAAGCAGGAGAGCCAGCAAGACTGGCAGTGGATACAAAAGCGCTTCGAGAGGCTG
CAACTGCATCGCAAGCAGCCGAACGGCCTGAATATCTGGACCTGTAAAGTCACCGGGCCTAGAAAGTCCCGTCACCTGCA
CGGATACCTTTTGGAAGATTCAAGCCTGCTTTTCTTAGAAACGCCGCCGAATAATCCCTACTTATCCCTGTTGTGTGAGA
CCACAGGAAGCGGACTTCATGAAAGCAATGAGGGTCAACATTGA

Protein sequence :
MLSLFQRKRPAVAAAPTPPSVTDLPKGLMRPESAASLLATPRRQKLLEHIWQRTSLSRKQFATLYRAPLERYAELVQAFP
ASEAHHHAYPGGMLDHGLEIVAYSLKLRQSHLLPIGASPEDQAAQSEAWTAAVAYAALLHDIGKIAVDLHVELADGSLWH
PWHGPLHQPYRFRYRDDREYRLHSAATGLLYRQLLDRDALDWLSGYPDLWGPLLYVLAGQYEHAGVLGELVVQADRASVA
QELGGDPARAMAAPKHALQRKLLDGLRYLLKEQLKLNQPEASDGWLTEDALWLVSKTVSDKLRAHLLSQGIDGIPANNTA
VFNVLQDHGMLQPTSDGKAVWRATVTSTTGWSHSFTLLRLTPTLIWEPRERPAPFPGTVAIDVAPTDKEADVFTTISTAG
PLAAPEGQEDPPGEGGRSSSAPSSKFQTLPDVMEDMLSMVGIGDLPAIGQDAAVLSEQVPAARPEIPTLPASLPSSPAPA
PSIAHPSGEHFMAWLKQGILSRRLIINDAKALVHTVSGTTYLVSPGVFQRYAQEHPQVGAQAKQESQQDWQWIQKRFERL
QLHRKQPNGLNIWTCKVTGPRKSRHLHGYLLEDSSLLFLETPPNNPYLSLLCETTGSGLHESNEGQH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C36 AAN62129.1 conserved hypothetical protein Not tested PAGI-2(C) Protein 0.0 78
ORF SG44 AAN62266.1 conserved hypothetical protein Not tested PAGI-3(SG) Protein 0.0 67
unnamed ABR13343.1 hypothetical protein Not tested PAGI-5 Protein 4e-139 50
RL003 AAP84130.1 pathogenesis-related protein Not tested PAPI-1 Protein 4e-138 50
EXA2 ABD94612.1 conserved hypothetical protein Not tested ExoU island A Protein 5e-139 50