Gene Information

Name : Ajs_1241 (Ajs_1241)
Accession : YP_985542.1
Strain : Acidovorax sp. JS42
Genome accession: NC_008782
Putative virulence/resistance : Resistance
Product : MerR family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG0789
EC number : -
Position : 1319385 - 1319819 bp
Length : 435 bp
Strand : -
Note : TIGRFAM: Cd(II)/Pb(II)-responsive transcriptional regulator; PFAM: regulatory protein, MerR; KEGG: rme:Rmet_5946 transcriptional regulator, MerR family

DNA sequence : 
ATGAACCTCCAGATCGGAGAACTTGCCAAACGCACTGCCTGTCCGGTGGTGACGATCCGCTATTACGAGCGAGAGGGGCT
GCTGCCGCAGGCTCGCCGCAGCCAGGGGAACTTCCGCTTGTATGGAGAGGCGCATGTGGAGCGCTTGCAATTCATACTTC
GCTGCCGTTCGCTGGACATGCCATTGAGCGACGTGCGAACTTTGCTGAGCTACCGGGATCGGCCTGCGCAGGATTGCGGT
GAAGTCAACCTTCTTCTCGATGAGCGCATCCGGGAGGTGAAATCACGGATTGAAGCGCTGCGCGAGCTGGAACACCAGCT
GGCCGATTTGCGCGATGCATGTTCCGGTGCCAGACCTGTCGAAGCGTGCGGAATTCTGCAAGGGCTGTCGGGATGCGCAT
GTGATGCGCAGGAAGCAACTGCTCCCGTCAAGTGA

Protein sequence : 
MNLQIGELAKRTACPVVTIRYYEREGLLPQARRSQGNFRLYGEAHVERLQFILRCRSLDMPLSDVRTLLSYRDRPAQDCG
EVNLLLDERIREVKSRIEALRELEHQLADLRDACSGARPVEACGILQGLSGCACDAQEATAPVK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C98 AAN62191.1 putative transcriptional regulator Not tested PAGI-2(C) Protein 6e-34 53
ACICU_00234 YP_001844893.1 transcriptional regulator Not tested AbaR20 Protein 8e-31 50
pbrR CAJ77094.1 Transcriptional regulator Not tested AbaR1 Protein 5e-31 50
cadR AGK36653.1 MerR family transcriptional regulator Not tested AbaR26 Protein 5e-31 50
cadR ACN81029.1 MerR family transcriptional regulator Not tested AbaR5 Protein 7e-31 50
cadR ADZ05769.1 MerR family transcriptional regulator Not tested AbaR11 Protein 1e-30 49
cadR ACS32041.1 MerR family transcriptional regulator Not tested AbaR5 Protein 2e-30 49
pbrR CAJ77021.1 transcription regulator Not tested AbaR1 Protein 1e-30 49

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ajs_1241 YP_985542.1 MerR family transcriptional regulator BAC0301 Protein 2e-31 60
Ajs_1241 YP_985542.1 MerR family transcriptional regulator BAC0058 Protein 5e-33 55
Ajs_1241 YP_985542.1 MerR family transcriptional regulator BAC0462 Protein 1e-21 41