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Name : Ajs_1214 (Ajs_1214) Accession : YP_985521.1 Strain : Acidovorax sp. JS42 Genome accession: NC_008782 Putative virulence/resistance : Unknown Product : integrase catalytic subunit Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4584 EC number : - Position : 1289444 - 1290976 bp Length : 1533 bp Strand : + Note : PFAM: Integrase, catalytic region; KEGG: pol:Bpro_5321 ISPsy20, transposase IstA DNA sequence : ATGGACATGATTGGCAGGATCCGGCATTTGCATGCCCGGAAGAACAAATCGGAGCGCGAGATATCGCGCATGACAGGGCT CTCGCGCAACACGGTTGCGAAGTGGCTGCACGGGGAAGTGGACGGTCCACCGAAGTACCGGCGCGGCGAGCAGCCCAACA AACTCACGGCGTTCCATGACGTGCTCAGGCAGGCCTTGAAGGCTGATGCACGTCGGCCCAAACACGAGCGGCGCACAGCC AAGGCGCTGTACGCCGAGATCAGGCGTGCGGGCTATGAGGGTGGTTACACGCGGGTGACCGACTTCATCCGGGCATGGCG CCAGGGCGAAGGCCAGGGGTCTGCGGGCAACGCCTTCGTGCCGTTGGCCTTCGAGCTGGGCGAGGCTTTCCAGTTCGACT GGAGCGAGGAAGGCATGGTGATCGGCGGCATCTACTACCGGGTGCAGGTCTCACACATGAAGCTGTGCGCCAGTCGGGCT TTCTGGCTGGTGGCCTACCCCAGCCAGGGCCACGAGATGCTGTTCGATGCCCACACCCGCAGCTTCGCCGCGCTGGGTGG CGTGGCGCGCCGGGGCATCTATGACAACATGAAGACTGCGGTAGACAAGGTCAAGAAGGGCAAGGGGCGCATCGTCAACG AGCGCTTTGCCACCATGTGCGCGCATTACCTGTACGACCCGGACTTCTGCAACGTGGCCAGCGGCTGGGAGAAAGGGGTG GTGGAGAAGAACGTGCAAGACAGCCGCCGGCGCATCTGGATCGACGCGGCCAAGATCAAGTTCGGCAGCTTTACCGAACT CAACGCCTGGCTGGCCCAGCGCTGCCGCGCGTTGTGGGACGAGGTGCGCCACCCCGAGCACACCCAGTTCAGCGTGGCCG AGATGCTCGAACACGAGCGCGCGCACCTCATGCCCATGCCCGTGCCGTTCGATGGCTACGTCGAGAAACCCGCTCGGGTC ACCAGCACCTGTCTGGTGTCGGTGGCGCGCAACCGCTATTCGGTGCCGTGCGAACGGGTGGGCCAGATGGTCAGTACGCG GTTGTATCCGGGCAGCGTCGCCATCGTGGCCGACGACACCATCGTGGCCCGCCACGACCGGCTGAGCAACGCGGGCGAGA CCCGGTACGACTGGCAGCACTACATCCCGCTGCTGCAGAGAAAGCCCGGTGCCCTGAGGAACGGCGCGCCCTTTGCCGAC ATGCCCGAGCCGCTGCAGCGGCTGCGCCGTGGGCTGCTGCGCAACCCGGGCGGCGACCGGGTGATGGCGCAGGTGTTGGC CATTGTGCTCAGCGCCGGTCTGGACGCGGTGCTGGTGGCCATCGAGCTGGCGCTGGAGAGTGGGCCGCCTGGCAAGGTCA GTGTGGAGCACGTGGTCAACGTGCTGAACCGGCTCAACGCGCAGCCGGTGCCGCCCACGGCGGCCACGCTGCTGAGAGCG ACCACGCCGCCGCTGGCGAACACGGCGCGCTACGACAGCCTGCGCTCGGACACCGTGGGTGCCATCACCGAAGGAGCCGA CCATGAAGACTGA Protein sequence : MDMIGRIRHLHARKNKSEREISRMTGLSRNTVAKWLHGEVDGPPKYRRGEQPNKLTAFHDVLRQALKADARRPKHERRTA KALYAEIRRAGYEGGYTRVTDFIRAWRQGEGQGSAGNAFVPLAFELGEAFQFDWSEEGMVIGGIYYRVQVSHMKLCASRA FWLVAYPSQGHEMLFDAHTRSFAALGGVARRGIYDNMKTAVDKVKKGKGRIVNERFATMCAHYLYDPDFCNVASGWEKGV VEKNVQDSRRRIWIDAAKIKFGSFTELNAWLAQRCRALWDEVRHPEHTQFSVAEMLEHERAHLMPMPVPFDGYVEKPARV TSTCLVSVARNRYSVPCERVGQMVSTRLYPGSVAIVADDTIVARHDRLSNAGETRYDWQHYIPLLQRKPGALRNGAPFAD MPEPLQRLRRGLLRNPGGDRVMAQVLAIVLSAGLDAVLVAIELALESGPPGKVSVEHVVNVLNRLNAQPVPPTAATLLRA TTPPLANTARYDSLRSDTVGAITEGADHED |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAN85144.1 | unknown | Not tested | Hrp PAI | Protein | 9e-158 | 64 |
| EC042_4098 | YP_006098381.1 | transposase | Not tested | Tn2411 | Protein | 6e-106 | 49 |
| istA | AAN62228.1 | putative transposase | Not tested | PAGI-3(SG) | Protein | 1e-86 | 44 |
