|
Name : Ajs_1213 (Ajs_1213) Accession : YP_985520.1 Strain : Acidovorax sp. JS42 Genome accession: NC_008782 Putative virulence/resistance : Unknown Product : phage integrase family protein Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4974 EC number : - Position : 1288148 - 1289383 bp Length : 1236 bp Strand : + Note : PFAM: phage integrase family protein; KEGG: xcv:XCV2261 phage-related integrase DNA sequence : ATGATGACACTCTCTGATCTGACCGTGCGGCAAGCCAAGGCCGCCGAGAAAACCTACAGCATCCCCGACACCGATGGCCT CGGCCTGGTGGTCGCCCGCACCGGCGGCAAGTCGTGGCATTTGCGCTATTACTGGCTCGGCAAGCAAAAGCGCATCTCCC TGGGGAACTACCCCGAGATCGGTTTGCGCGAAGCGCGCACCTTGCGCGACGAAGCCCGGGCGCTTCTGGCAAAGGGCGTC AACCCCCATACCGATCGGAAACAGAAGCGACACGCGGTCAAGCTTGCGGCCGACTACACCTTCAAGGCCGTCTTCGATGC GTGGGTCGAGCATCGCCGCAAGGAAATCAAGGAGGGCAGGAACAGCACGCTGTCGCAGATCCTGCGGATCTTCAACAAGG ACGTGCTGCCTAGCCTCAAGCAGATGTCGATCTACGACATTCGCCGGCCCCAACTCCTGGGCGTCCTGGCGAGGATCGAG GAGCGCAAGGCGTTCACCACTGCCGAGAAGGTCCGCACCTGGCTGGGGCAGTTGTTCCGCTATGCCCTCGTCATCGTGGA GGGGCTGGAAGCCAATCCGGCCTCCGACCTGGACGTGGTGGCCGAGCCCAAGCCCCCGGTGAACCACAACCCCTACCTGC ATCTTCCGGAGCTTCCCGAGTTCCTGCACAAGCTCAGGCTCTACAACCCTCGTGGTTGGCAGACCCAACTCGGCATCCGG CTGCTGTTCCTGACCGGCGTGCGTACCGGCGAGCTGCGGCTGGCGACCCCGGACCAGTTCGATCTCGACCGTGGCCTGTG GATCATCCCGCCGCAGATCGTCAAGCAACTCCAGGACGAGATGCGCAAGGCCGGCAAGCGCCCGCAGGACGTTCCGCCCT ACATCGTGCCGTTGTCCGTGCAGGCCATCGAGATCGTGCGCTACCTGTTGGGTGTGATGAGGCCGGCTCAGGTCCATCTG CTCACGCACCGCAGCGAACTCAAGAAGCGCATCAGCGAGAACACCCTCAACGCGGCCTTGAAACGAATGGGCTACAAGGA TCAACTGACCGGTCACGGCATCCGCGGAACCATCTCGACGGCGCTCAACGAGATCGGCTATCCCAAGATTTGGGTGGACG CGCAGCTTTCGCACTCGGACCCGAACAAGGTGCGTATTCCACGCGATGGCGGACACGATTGTTGGCGCCGACCGAAAACT GAGCCACTTTTGAGGGTAGTGCCGACCCAAAACTGA Protein sequence : MMTLSDLTVRQAKAAEKTYSIPDTDGLGLVVARTGGKSWHLRYYWLGKQKRISLGNYPEIGLREARTLRDEARALLAKGV NPHTDRKQKRHAVKLAADYTFKAVFDAWVEHRRKEIKEGRNSTLSQILRIFNKDVLPSLKQMSIYDIRRPQLLGVLARIE ERKAFTTAEKVRTWLGQLFRYALVIVEGLEANPASDLDVVAEPKPPVNHNPYLHLPELPEFLHKLRLYNPRGWQTQLGIR LLFLTGVRTGELRLATPDQFDLDRGLWIIPPQIVKQLQDEMRKAGKRPQDVPPYIVPLSVQAIEIVRYLLGVMRPAQVHL LTHRSELKKRISENTLNAALKRMGYKDQLTGHGIRGTISTALNEIGYPKIWVDAQLSHSDPNKVRIPRDGGHDCWRRPKT EPLLRVVPTQN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| int | AAN62223.1 | putative integrase | Not tested | PAGI-3(SG) | Protein | 2e-138 | 73 |
