Gene Information

Name : Ajs_1065 (Ajs_1065)
Accession : YP_985376.1
Strain : Acidovorax sp. JS42
Genome accession: NC_008782
Putative virulence/resistance : Unknown
Product : glycine betaine/L-proline ABC transporter ATPase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG4175
EC number : -
Position : 1117998 - 1119374 bp
Length : 1377 bp
Strand : -
Note : KEGG: sbo:SBO_2839 ProV; TIGRFAM: glycine betaine/L-proline ABC transporter, ATPase subunit; PFAM: CBS domain containing protein; ABC transporter related; SMART: AAA ATPase

DNA sequence :
GTGTGCCGCTTTGGCCTTTGCGTTCCTGCCGCCATTGGTGCGGCAGGGGCCCGTTCAACCCGTCACAACCGAGGAAGGAC
CCACACGGTGGCCAAGCAAATCATCATCGACCATGTCTTCAAGGTCTTCGGCGACTCGCCGCAGGAAGCGCTGCGCCTGG
TGCAGCAGGGCCTGAGCAAGCAGCAGATCCTGGAGCGCACGGGCCATTCCATCGGTGTGTTCGATGCCAGCTTCACCATC
GAGGCCGGCGAAATCTTCGTCGTCATGGGCCTATCGGGCTCGGGCAAGTCCACGCTGGTGCGCATGCTCAACCGCCTGAT
CGAGCCCACCAGCGGCCGCATCCTGGTGGACGGCCAAGACATCAACCGTCTGGGCGACCGCGAGTTGCGCGCGCTGCGGC
GCAAGGACATCAGCATGGTGTTCCAGTCGTTCGCCCTGATGCCGCACATGACGGTGCTGGACAACGCCGCCTTCGGGCTG
GAACTCGCCGGAGTGGACCGTGCCGAGCGCCAGCAGGCAGCGCAGGAGGCCCTGCAGCAGGTGGGCCTGGGCGCCTGGGG
CGCCAGCTACCCCGACGAACTCTCGGGCGGCATGCAGCAACGCGTGGGGCTGGCGCGCGCGCTGGCAGCCGACCCGTCCA
TCCTGCTCATGGACGAGGCGTTCTCCGCGCTGGACCCGATCATCCGCACCGAGATGCAAAGCGAGCTGCTGCGCCTGCAG
CAGATCAAGCGCCGCACCATCGTCTTCATCTCGCACGACCTGGACGAGGCCATGCGCATCGGCGACCGCATCGCCATCAT
GAAGGACGGCCACGTGGTGCAGGTGGGCACGCCCGACGAGATCCTGCGCGCGCCTGCCAACGACTACGTACGCAGCTTCG
TGCGCGGCGTGGACGCTGCGGCGGTGTTCAAGGCGGCCGACATCGCGCGCCAGGCGCTCACCGTGGTGTCCGAGCACGAC
GACCGCGGCTGCCGCGCGGCACTGCGCCTGCTGGAGGACTCGGACCGCGACCACGCCTACGTGCTCAACAGCCGCAAGCG
CCTGCTGGGCGTGGTGTCGTCGCAGTCGCTGCGCGAAGCGCTGCACGGCCGCCAGGGCGCGCTGGGCCTGCACCACGCCT
TCTTACCCAATGCCCAGCCGCTGGATGCCTCCACGCCGGTGGCGGACCTGTTCGGCCCCATGGGCAGTGCGCCCTGCCCG
CTGCCGGTGGTGGACGAGGACGGCATCTACCAGGGCGTGATCAGCCGCACCACGCTGATGAAGTTCCTGGACCGCGACAC
GCCGCCCGTGCCGCCGCCGCAGGCGGAGGTGCCACCCATCCAGCTCAACCCCCACTTCCCGGCGCAAGCCAGCACGCCGG
TGGCAGCGCCCCGCTAA

Protein sequence :
MCRFGLCVPAAIGAAGARSTRHNRGRTHTVAKQIIIDHVFKVFGDSPQEALRLVQQGLSKQQILERTGHSIGVFDASFTI
EAGEIFVVMGLSGSGKSTLVRMLNRLIEPTSGRILVDGQDINRLGDRELRALRRKDISMVFQSFALMPHMTVLDNAAFGL
ELAGVDRAERQQAAQEALQQVGLGAWGASYPDELSGGMQQRVGLARALAADPSILLMDEAFSALDPIIRTEMQSELLRLQ
QIKRRTIVFISHDLDEAMRIGDRIAIMKDGHVVQVGTPDEILRAPANDYVRSFVRGVDAAAVFKAADIARQALTVVSEHD
DRGCRAALRLLEDSDRDHAYVLNSRKRLLGVVSSQSLREALHGRQGALGLHHAFLPNAQPLDASTPVADLFGPMGSAPCP
LPVVDEDGIYQGVISRTTLMKFLDRDTPPVPPPQAEVPPIQLNPHFPAQASTPVAAPR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
opuAA YP_281521.1 glycine betaine transport ATP-binding protein Not tested Not named Protein 1e-81 50