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Name : Pnap_0766 (Pnap_0766) Accession : YP_981006.1 Strain : Polaromonas naphthalenivorans CJ2 Genome accession: NC_008781 Putative virulence/resistance : Virulence Product : type IV-A pilus assembly ATPase PilB Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 808992 - 810728 bp Length : 1737 bp Strand : + Note : TIGRFAM: type IV-A pilus assembly ATPase PilB; PFAM: type II secretion system protein E; General secretory system II, protein E domain protein; KEGG: pol:Bpro_0841 type II secretion system protein E DNA sequence : ATGTCCGCCACTGATACCGCAATAAAACCCCCAGTTTCCATGGCATTGCCTGGCTTGGGCCGGGCCTTGATCGCTGCCGG CAAGCTGGGCCAAAAGGCGGCCGAGGAAATTTTTCTCAAGGCGCAAGCCAGTCGAACCAGTTTCATTGCCGAGCTGACAG GCTCAGGGGCGGTGTCGGCATTCGATCTGGCGCACCTCATGTCAACGTCCTTCGCCGCGCCCCTTGTGGACATGGATGCC ATCGACAACCAGCGTTTGCCCAAGGGCCTGCTCGACAGCAAGATATGCCTGACCTGCCGCATTGTTGTACTGGGCAAGCG CAACAACCGACTGATCGTCGCAACCGCTGATCCATCGGATCAGGGTGCTGCGGAAAAAATCAAGTTTTCTACCCAGCTGG GCGTGGACTGGGTCATTGCCGAATACGACAAGCTGTCCCGGCTGGTGGATGTTTCCAACGCCTCGGCTGCCGAAGCGATT GAAAACATCGTGGGCTCGGATTTCGAATTTGATGAGGAGATGGCGGATTCGCCCGGTGTAGAAAACACTGAAGCCAGCGT GTCGGAAGTTGAAGACGCGCCGGTTGTCAAGTTCCTGCAGAAAATGCTGATAGACGCTTTCAACATGCGTGCTTCCGATC TGCACTTTGAACCTTTCGAGCATTCCTACCGGGTCCGGTTTCGGGTCGATGGGGAGTTGCGTGAAATTTCTTCTCCGCCG GTCGCCATCAAGGAAAAGCTGGCAGCGCGCATCAAGGTGATTTCCAAGCTGGACATTTCCGAGAAACGGGTGCCGCAGGA CGGCAAGATGAAGCTCAAGATTGGTCCTGACCGGGTGATCGACTTCCGGGTCAGTACCCTGCCGACCATGTTTGGCGAAA AAATCGTGATTCGTATCCTGGATCCGAGCAGCGCCAAACTGGGGATTGATGCGCTGGGTTATGAGCCGGCTGAAAAGGAG CGCTTGCTGGAGGCCATCAAACGGCCTTACGGCATGGTTCTGGTCACCGGGCCGACGGGTTCGGGCAAAACCGTGTCGCT CTACACCTGCCTGAACATTTTGAATACCGCCGGCGTCAACATCGCCACCGCAGAAGATCCGGCTGAAATCACTTTGCCCG GCGTGAACCAGGTCAGCATGAACGAGAAAGCCGGAATGACTTTTCCGGTGGCCCTGAAGGCCTTTTTGCGCCAGGATCCG GACATCATCATGGTGGGCGAAATCCGCGATGTCGAAACCGCCGACATTGCCATCAAGGCCGCGCAGACCGGCCATCTGGT TCTGTCCACGCTGCATACCAACGATGCGCCGACGACCCTGACACGCATGCGCAACATGGGCATTGCGCCTTTCAACATCG CGTCGAGCGTCATTCTGATTACGGCCCAGAGGCTGGCGCGGCGCCTGTGCCCGCACTGCAAAACCCCGATAGATATTCCG CGTGAAACATTGCTTGAGGCCGGCTTTAAAGAGGATGAAGTGGACGGCTCATGGACGCCCTATCATCCGGTGGGCTGCGA CAAGTGCAACAACGGCTACAAGGGCCGCTTGGGCATTTACCAGGTCATGCCAATTTCCGAGGAAATTCAGCGCATTGTCC TGCGTGATGGCAGTGCCATGGAAATTGCAGCCCAGGCCCAGGCTGAAGGTGTCAGGAGCCTGCGCCAGTCCGGTTTGTAC AAAGTTAAACTGGGAATGACTTCAATGGAAGAAATTCTGGGCTGCACCAATGTTTGA Protein sequence : MSATDTAIKPPVSMALPGLGRALIAAGKLGQKAAEEIFLKAQASRTSFIAELTGSGAVSAFDLAHLMSTSFAAPLVDMDA IDNQRLPKGLLDSKICLTCRIVVLGKRNNRLIVATADPSDQGAAEKIKFSTQLGVDWVIAEYDKLSRLVDVSNASAAEAI ENIVGSDFEFDEEMADSPGVENTEASVSEVEDAPVVKFLQKMLIDAFNMRASDLHFEPFEHSYRVRFRVDGELREISSPP VAIKEKLAARIKVISKLDISEKRVPQDGKMKLKIGPDRVIDFRVSTLPTMFGEKIVIRILDPSSAKLGIDALGYEPAEKE RLLEAIKRPYGMVLVTGPTGSGKTVSLYTCLNILNTAGVNIATAEDPAEITLPGVNQVSMNEKAGMTFPVALKAFLRQDP DIIMVGEIRDVETADIAIKAAQTGHLVLSTLHTNDAPTTLTRMRNMGIAPFNIASSVILITAQRLARRLCPHCKTPIDIP RETLLEAGFKEDEVDGSWTPYHPVGCDKCNNGYKGRLGIYQVMPISEEIQRIVLRDGSAMEIAAQAQAEGVRSLRQSGLY KVKLGMTSMEEILGCTNV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 1e-78 | 41 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 9e-79 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Pnap_0766 | YP_981006.1 | type IV-A pilus assembly ATPase PilB | VFG0233 | Protein | 4e-132 | 52 |
| Pnap_0766 | YP_981006.1 | type IV-A pilus assembly ATPase PilB | VFG0112 | Protein | 7e-141 | 52 |
| Pnap_0766 | YP_981006.1 | type IV-A pilus assembly ATPase PilB | VFG1880 | Protein | 3e-129 | 49 |
| Pnap_0766 | YP_981006.1 | type IV-A pilus assembly ATPase PilB | VFG0182 | Protein | 2e-80 | 43 |
| Pnap_0766 | YP_981006.1 | type IV-A pilus assembly ATPase PilB | VFG2048 | Protein | 2e-79 | 42 |
