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Name : Pnap_0755 (Pnap_0755) Accession : YP_980995.1 Strain : Polaromonas naphthalenivorans CJ2 Genome accession: NC_008781 Putative virulence/resistance : Virulence Product : general secretory pathway protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 798974 - 800383 bp Length : 1410 bp Strand : - Note : KEGG: rfr:Rfer_0543 type II secretion system protein E; TIGRFAM: general secretory pathway protein E; PFAM: type II secretion system protein E; SMART: AAA ATPase DNA sequence : ATGGAGCATCCCGCCCACTACCCCCTGCCCTATGCGTTTGCCCGCAGCCAGCAGTTGCTGCTTGAGGACTTTGGCGGCGA CCTGACGCTGTGGCTGCACAGCCTGGGCACACCCGAAACGGCGGGCGCCGTGAGCGAGGTGATGCGCAAGTTCGATGTGC AGCACATCAACGTCGAGGCGCCCGAGTTGCTCCAGCAGCGCATCAGCGCCGCCTATTCCCAGAGCGAATCCAGCGCCGCC ACCGTCATCAGCGAGGTTGAAAGCGACGTCGATCTGTCGCGCATGATGCAGGCGCTGCCCGCCATCGAGGACTTGCTCGA AACGTCCGACGACGCGCCCATCATCCGCATGCTCAACGCGCTGCTGACGCAGGCCGTGCGCGACGGCGCCAGTGACATCC ACATCGAGCCCTACGAGCGCCATTCCAGCGTGCGCTTCCGGGTCGATGGCTCGCTGCGCAACGTGGTGCAACCCAACCGG GCGCTGCATGCCGCATTGATCTCGCGCCTCAAAATCATGGCCGAACTCGACATTGCCGAAAAACGCCTGCCGCAGGACGG CCGCATCTCGCTGCGCATCGGCACGCGGGCGGTCGATGTGCGCGTCAGCACGCTGCCCAGCGCCCACGGCGAGCGCGCTG TGCTGCGGCTGCTCGACAAGAGCGGCGACCGGCTCAACCTGGAAGCCGTCGGCATGCAGGGCGATGTGCTGTCGCGCTTC GAGCACCTGGTGGCCCAGCCGCACGGCATCATCCTGGTGACCGGCCCGACCGGCTCGGGCAAGACCACCACGCTGTATGC GGCGATGGAGCGGCTCGATACCCGGCGCCAGAACATCATGACGGTGGAAGACCCGATCGAGTACGAACTGGCCGGCGTCG GCCAGACGCAGGTCAACGCCAAGATCGACCTGGACTTCGCCAAGGCCCTGCGCGCCATCCTGCGCCAGGATCCGGACGTG ATCATGATCGGCGAGATCCGCGACTTCGAAACCGCGCAAATCGCCATTCAGGCTTCGCTCACAGGCCACCTGGTGCTGGC CACGCTGCACACCAACGACGCCGCCAGCGCCGTGACCCGGCTGACCGACATGGGCATCGAGCCCTTCCTGCTCAGTTCGT CGCTGCTCGGCGTGCTGGCGCAGCGGCTGGTGCGCAAGGTCTGCGTGCATTGCAAAGGCGCCGGCTGCCCGAGCTGCGGC CAGACCGGCTACCAGGGCCGCACCGGCGTGTTCGAACTGCTGGCAACCGACGACGCCATCCGGGCGCAGATCCATCACCA GGCCGCCGAAGCCGACCTGCGCGAAGCAGCGCTGAAGAACGGCATGACGCTGATGCGCGACGACGGCGAGCGGCTGGTGC AAGCCGGCATCACCACGCGCGAGGAACTGGTGCGGGTGACCCGCGACTGA Protein sequence : MEHPAHYPLPYAFARSQQLLLEDFGGDLTLWLHSLGTPETAGAVSEVMRKFDVQHINVEAPELLQQRISAAYSQSESSAA TVISEVESDVDLSRMMQALPAIEDLLETSDDAPIIRMLNALLTQAVRDGASDIHIEPYERHSSVRFRVDGSLRNVVQPNR ALHAALISRLKIMAELDIAEKRLPQDGRISLRIGTRAVDVRVSTLPSAHGERAVLRLLDKSGDRLNLEAVGMQGDVLSRF EHLVAQPHGIILVTGPTGSGKTTTLYAAMERLDTRRQNIMTVEDPIEYELAGVGQTQVNAKIDLDFAKALRAILRQDPDV IMIGEIRDFETAQIAIQASLTGHLVLATLHTNDAASAVTRLTDMGIEPFLLSSSLLGVLAQRLVRKVCVHCKGAGCPSCG QTGYQGRTGVFELLATDDAIRAQIHHQAAEADLREAALKNGMTLMRDDGERLVQAGITTREELVRVTRD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 2e-105 | 48 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 1e-105 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Pnap_0755 | YP_980995.1 | general secretory pathway protein E | VFG0182 | Protein | 1e-112 | 53 |
| Pnap_0755 | YP_980995.1 | general secretory pathway protein E | VFG1876 | Protein | 4e-109 | 50 |
| Pnap_0755 | YP_980995.1 | general secretory pathway protein E | VFG2048 | Protein | 1e-104 | 48 |
| Pnap_0755 | YP_980995.1 | general secretory pathway protein E | VFG2426 | Protein | 5e-67 | 44 |
| Pnap_0755 | YP_980995.1 | general secretory pathway protein E | VFG0233 | Protein | 3e-77 | 43 |
