Gene Information

Name : Pnap_0546 (Pnap_0546)
Accession : YP_980787.1
Strain : Polaromonas naphthalenivorans CJ2
Genome accession: NC_008781
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1116
EC number : -
Position : 575351 - 576088 bp
Length : 738 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bcn:Bcen_6521 ABC transporter related

DNA sequence :
ATGAGCACGGCACTACTGGACATCGAGGTGCGCCGCAAGACCTTTGGCGATGCTACCGTGCTGCAGGGCATTCGTCTGCA
AATCAGCGCGGGCGAAATTGTCAGCCTGGTTGGCGCCAGCGGCTGCGGCAAGAGCACGCTGCTACGCATCGTGGCCGGAC
TCGAAACGGCTTATCAGGGGCGCATCACGCTGGGTGGCCAGCCGCTGGCCGGACTGAGCCGCGATGTCGGTTTTATTTTT
CAGGAGCCGCGCCTGTTTCCCTGGCTGAGCGTGGCGCAAAACGTCGCCTTCAGCGCCGGAGCGCAAGGCGCACGCGATCC
GCGCGTGGCGCAGTTGCTCGCCGAAGTGGGACTGGCCGGCCTAACCGATGCGCTGCCCAAGCAGCTCTCGGGCGGCCAGG
CGCAGCGCGTGGCCATTGCGCGCGGCCTGTTTGGCCAGCCGCGCCTGCTGCTGCTGGACGAGCCGTTTTCAGCCGTCGAT
GCCTTTACCCGCATGCATCTGCAGGACATGCTGCTCGACATTGCGCGGCGCCACGGCACCACGCTGCTGCTGGTGACGCA
TGACATTGACGAGGCGGTCTATCTGGCCGACCGGGTCTGGGTGCTCGACAGCAAGCCCGGCCGCCTGTCGGCCGACATGG
CCATTGACCTGCCCCAACCCCGCCAGCGCGATACCGAGGCGCTGGCGCAGCGGCGCATTGGCGTGCTGCACGCGCTCCAG
GCAGTTCACGCCATTTGA

Protein sequence :
MSTALLDIEVRRKTFGDATVLQGIRLQISAGEIVSLVGASGCGKSTLLRIVAGLETAYQGRITLGGQPLAGLSRDVGFIF
QEPRLFPWLSVAQNVAFSAGAQGARDPRVAQLLAEVGLAGLTDALPKQLSGGQAQRVAIARGLFGQPRLLLLDEPFSAVD
AFTRMHLQDMLLDIARRHGTTLLLVTHDIDEAVYLADRVWVLDSKPGRLSADMAIDLPQPRQRDTEALAQRRIGVLHALQ
AVHAI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 4e-41 48
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-24 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 6e-24 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-24 42
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-23 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pnap_0546 YP_980787.1 ABC transporter-like protein NC_008702.1.4606598. Protein 5e-20 42