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Name : Pnap_0044 (Pnap_0044) Accession : YP_980291.1 Strain : Polaromonas naphthalenivorans CJ2 Genome accession: NC_008781 Putative virulence/resistance : Virulence Product : TRAP dicarboxylate transporter subunit DctM Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG1593 EC number : - Position : 44646 - 45938 bp Length : 1293 bp Strand : - Note : TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: sme:SMa0250 conserved hypothetical DedA-like protein DNA sequence : ATGAGCAACGAAGGCCTCGCTTTCATCGTTTTTTCAGCCGGCATGCTGCTGCTCATGGGCATCGGCATGAACATGGGCCT GGCGCTGGTGCTGACCGGCGCCGGCATGGCCGCCGTGCTCGGCTTCTGGGACACCCAGCTGCTGGCGCAAAACCTGGTCG CCGGCGTGGACAGCTTTCCGCTGCTGGCCGTGCCATTTTTTATCCTGGCCGGCGAGCTGATGAACTCGGGCGGCATCAGC AGCCGCATCATCGCCATGGCGCAGGCCTGGGTCGGCCACATTCGCGGCGGGCTGGGCTTCGTGGCGATTGCCGCGGCCGT GATGATGGCCAGCATGAGCGGCTCGGCGCTGGCCGACACCGCCGCGCTGGCGACCATCCTGCTGCCGATGATGCGCCAGC AGGGCTACCCGATGCACACCTCGGCCGGCCTGATTGCCTCGGGCGGCATCATCGCGCCCATCATTCCGCCGTCCATGCCC TTCGTGATCTACGGCGTGACCACCAATACGTCGATCTCGGCGCTGTTCATCTCGGGCATCGTGCCGGGCATCATCATGGG CATCGGCCTGATCATTGCGTGGAAACTGGTGCTGCGCAAGATGGACCTGCCGCAAGGCCAGCCGCTGCCCATGAAGGAAC GGCTGCGCGCCACCGCCAAGGCTTTCTGGGCCATGCTGATGCCGATCATCATCATCGGCGGCATGAAAACCGGCATCTTC ACGCCGACCGAAGCGGCCGTGGTGGCCGCGTTCTACGCGCTGTTCGTCGCCCTGTTCGTGCACCGCGAGATGAAGCTGGC CGAGATCCACGGCGTGCTGGTGCGCGCGGGCAAGACCACCGCCATCGTCATGTTTTTGTGCGCCGGCGCCCAAGTAGCGA GCTACATGATCACGCTGGCCGACCTGCCGGGCACGCTCACCGGCTGGCTCGGCCCGCTGGTCGAAAGCCCCAAGCTCTTG ATGGCCGTGATGATGATCGTGCTGGTCATCGTCGGCACGGCGCTGGACCTGACGCCGACGATTTTGATCTTCGCGCCGGT GATGCTGCCGATTGCGGTCAAGGCCGGCATCGACCCGGTGTACTTCGGCCTGATGTTCGTGCTCAACGGCGCGATCGGCC TGATCACGCCGCCCGTGGGCACCGTGCTCAACGTGGTGGCCGGCGTCGGCCGGATGCCGCTGCACCGGGTGATCCAGGGG GTCAACCCTTTTCTCATCACCTATGTGCTGATCCTTGTCATGTTCGTCATCTTTCCCCAGATCGTCACCGCGCCCGTCGC GTGGATGCGCTAA Protein sequence : MSNEGLAFIVFSAGMLLLMGIGMNMGLALVLTGAGMAAVLGFWDTQLLAQNLVAGVDSFPLLAVPFFILAGELMNSGGIS SRIIAMAQAWVGHIRGGLGFVAIAAAVMMASMSGSALADTAALATILLPMMRQQGYPMHTSAGLIASGGIIAPIIPPSMP FVIYGVTTNTSISALFISGIVPGIIMGIGLIIAWKLVLRKMDLPQGQPLPMKERLRATAKAFWAMLMPIIIIGGMKTGIF TPTEAAVVAAFYALFVALFVHREMKLAEIHGVLVRAGKTTAIVMFLCAGAQVASYMITLADLPGTLTGWLGPLVESPKLL MAVMMIVLVIVGTALDLTPTILIFAPVMLPIAVKAGIDPVYFGLMFVLNGAIGLITPPVGTVLNVVAGVGRMPLHRVIQG VNPFLITYVLILVMFVIFPQIVTAPVAWMR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC0395_A1375 | YP_001217318.1 | hypothetical protein | Not tested | VPI-2 | Protein | 1e-31 | 41 |
| VPI2_0025c | ACA01842.1 | TRAP dicarboxylate transporter DctM subunit | Not tested | VPI-2 | Protein | 7e-32 | 41 |
| VC1777 | NP_231412.1 | hypothetical protein | Not tested | VPI-2 | Protein | 1e-31 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Pnap_0044 | YP_980291.1 | TRAP dicarboxylate transporter subunit DctM | VFG1110 | Protein | 4e-32 | 41 |
