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Name : Pnap_4001 (Pnap_4001) Accession : YP_984214.1 Strain : Polaromonas naphthalenivorans CJ2 Genome accession: NC_008781 Putative virulence/resistance : Resistance Product : heavy metal translocating P-type ATPase Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG2217 EC number : - Position : 4264289 - 4266526 bp Length : 2238 bp Strand : - Note : TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 DNA sequence : ATGACCGACTGCTGCAACCAACCCTCTCACACGTCCGCCATTGCCGACCTTCCGGCCGCGCCTGTTCCCGCCGGCGCCAC GCGCTTTCGCATCCCGGCGATGGACTGCGCGGTTGAAGAGGCCGACATCCGGCGCGTGCTGGCCGGCGTGCCGGGCATCC GCTCGCTCAACTTTCAGCTGGTGGCGCGCACGCTGACGATTGATGCGCAGGCCGAAGCCCTTCAGGCGGCGGTCAGCGCG ATAGGCCAGGCGGGCTACAAGATGCAGCCGTTTACCGACGCCGGGCCAGCCGGCCAAACCCATGGTGCGCACGACCATGA GCACGATCACGCGCACGGCCACGGCGGCCTGCCCTCGGGCCTGCCGCGCCTGGCGGGCGCGCTGGGGCTGGCCGGGGTGG CCGAGGTGATCAGCTTTTTCGCCCCCGCCGGCCTGCCCTGGACGCTGGCCGGCATGGCGGTGGCGCTGGCCGCCATCTTC ATGGCCGGGCTGGAGGTGTACCAGAAAGGCCTCACGGCCTTGTTCAGGCGCCGGCTCAACATCAATGCGCTGATGACGGT GGCCGTCACCGGCGCCTTCCTGATCGGCCAGTGGCCCGAGGCGGCCATGGTGATGGCGCTGTATTCCATCGCCGAGCTGA TCGAGGCCATGGCGGTGGACCGCGCGCGCAATGCCATCAAGGGCCTGATGGCACTGGCGCCCGAAGCCGCCGAGCTTCGC CAGCCGGACGGCCAGTGGACCAGCGTGCCGCTCAATGACGTGCCGCTGGGCGCCACGGTGCGCGTGCGGCCCGGCGGGCG CATTCCGCTGGACGGCCTGGTCATGGCCGGCGCCAGCGCGGTTGATCAGGCGTCGGTCACAGGGGAAAGCCTGCCGGTGG ACAAGGCGGCGGGCGACAGCGTGTTCGGCGGCACCATCAGCCAGACCGGCGCGCTGGAGCTGCGGGTCACGGCGGCCGCC AGCGACAGCACGCTGGCGCGCATCATCCACGCCGTCGAGCAGGCGCAGGGCGCGCGCGCGCCCACGCAGACCTTCATCGA CCGCTTCGCCGCCATCTACACGCCGGCGGTGTTCATGCTGGCGCTGGCCGTGGCCGTCCTGACGCCGCTGCTGCTTGACT GGACCTGGCTGGAGGCGCTGTACAAGGCGCTGGTGCTGCTGGTGATTGCCTGCCCGTGCGCGCTGGTGGTGTCCACGCCG GTCACGGTCGTCAGCGGCCTGACCACGGCGGCGCGGCGCGGCATCTTGATCAAGGGCGGCACCTACCTCGAAGACGCCCG GCGGCTGAAGGCCGTGGCGCTGGACAAGACCGGCACCATCACCCAAGGCAAGCCGGTGCTGGTGGCCTGGCAGGCATGGG GCGGCGCGGATCAGGCCGAAGTCGGCCGCCTGGCGGCCACGCTGGCGGCGCGCTCCGACCATCCGGTGTCCAGCGCCATC GCGCAGGGGCTGCGGGCCGGCAACCCGCAAGGCGCCCTGCCGGCAGGGGCAGTTGAGGCGGTCGAGATGCTTGAGGCGCT GTCGGGGCGGGGCGTCCAGGGCCGGATCGGTGGACAACCGTACGCGCTGGGCAACCACCGGCTGATGGAGGAGCGCCAGC AATGCTCGCCCGCGCTGGAAGCGGCGCTGGCCCTGCACGAGCAGCAGGGCCGCACGGTCACGCTGCTGGCCAGCGCGCAG GGCGTGCTGGGAATCTTCGCGGTGGCCGACACCATCAAGGAAAGCTCGCGCCAGGCGATTGCCGAGCTGAAGGCGCTGGG CGTGACGCCCGTCATGCTCAGCGGCGACAACGCCGCCACGGCCAGCGCGGTGGCGGCGCAGGCCGGCATCATTGACGTGC GCGGCAACCTGCTGCCCGAGGAAAAACTGGCCGCCATCCGGCAGCTGCAAGGCCAGTACGGCGCGACCGGCATGATCGGC GACGGCATCAACGACGCGCCCGCGCTGGCGCAGGCCGACATCGGTTTTGCCATGGGCGGCGCGGGCACCGACATTGCCAT CGAGGCGGCCGACGTGGTCATCATGAACGACAACCTGCGGCGCATCGCCGAGACGGTGCGCCTGTCGCGGCGCACGCATG CCGTGCTGTGGCAAAACATCGCGCTGGCCCTGGGCATCAAGGCGGTGTTTTTCGTGCTGGCCGTGTTCGGCAGCGCGACC ATGTGGATGGCTGTGTTCGCCGACATGGGCGCCAGCCTGCTGGTGGTGGCCAACGGCCTGCGGCTGCTGCGCCGCTAG Protein sequence : MTDCCNQPSHTSAIADLPAAPVPAGATRFRIPAMDCAVEEADIRRVLAGVPGIRSLNFQLVARTLTIDAQAEALQAAVSA IGQAGYKMQPFTDAGPAGQTHGAHDHEHDHAHGHGGLPSGLPRLAGALGLAGVAEVISFFAPAGLPWTLAGMAVALAAIF MAGLEVYQKGLTALFRRRLNINALMTVAVTGAFLIGQWPEAAMVMALYSIAELIEAMAVDRARNAIKGLMALAPEAAELR QPDGQWTSVPLNDVPLGATVRVRPGGRIPLDGLVMAGASAVDQASVTGESLPVDKAAGDSVFGGTISQTGALELRVTAAA SDSTLARIIHAVEQAQGARAPTQTFIDRFAAIYTPAVFMLALAVAVLTPLLLDWTWLEALYKALVLLVIACPCALVVSTP VTVVSGLTTAARRGILIKGGTYLEDARRLKAVALDKTGTITQGKPVLVAWQAWGGADQAEVGRLAATLAARSDHPVSSAI AQGLRAGNPQGALPAGAVEAVEMLEALSGRGVQGRIGGQPYALGNHRLMEERQQCSPALEAALALHEQQGRTVTLLASAQ GVLGIFAVADTIKESSRQAIAELKALGVTPVMLSGDNAATASAVAAQAGIIDVRGNLLPEEKLAAIRQLQGQYGATGMIG DGINDAPALAQADIGFAMGGAGTDIAIEAADVVIMNDNLRRIAETVRLSRRTHAVLWQNIALALGIKAVFFVLAVFGSAT MWMAVFADMGASLLVVANGLRLLRR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SE0075 | NP_763630.1 | cadmium resistance protein B | Not tested | SCCpbp4 | Protein | 1e-115 | 42 |
| unnamed | BAB47609.1 | cadmium resistance protein B | Not tested | Type-III SCCmec | Protein | 5e-114 | 42 |
| cadA | BAC57487.1 | Probable cadmium-transporting ATPase (Cadmium efflux ATPase) | Not tested | Type-IIIinv SCCmec | Protein | 4e-114 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Pnap_4001 | YP_984214.1 | heavy metal translocating P-type ATPase | BAC0298 | Protein | 3e-161 | 62 |
