Gene Information

Name : Pnap_3894 (Pnap_3894)
Accession : YP_984111.1
Strain : Polaromonas naphthalenivorans CJ2
Genome accession: NC_008781
Putative virulence/resistance : Virulence
Product : response regulator receiver protein
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG4566
EC number : -
Position : 4152024 - 4152650 bp
Length : 627 bp
Strand : -
Note : PFAM: regulatory protein, LuxR; response regulator receiver; Sigma-70, region 4 type 2; KEGG: pol:Bpro_4652 two component transcriptional regulator, LuxR family

DNA sequence : 
ATGGAGCCAATCCACAATGCCACCGTTTATATCGTCGATGACGACAAGGGCGTGCGTGACGCGCTGGCCTGGCTGCTGCG
CTCCCGGCGCCTGCCCAGCGAAGCGTTCGCCAGTGCCGAGGCCTTCGATGCGCGGGTGGCCCATGGCTTTGAGGTCCGCT
CGCCTTCGTGCGTGCTGCTCGACGTGCGCATGGGCGCCCTGAGCGGGCTGGCCATGTTTGAAAAACTGATTACCTACGGC
CTGCTGCCCACCCTGCCGGTGATTTTCCTGACCGGCCATGCCGATGTGCCGACCGCCGTCGATTCGGTCAAGCGCGGCGC
CTTTGATTTTTTTGAAAAGCCTTTTTCGGACAACGCCCTGGTGGACCGGATCGAGCAGGCGCTGGTCCAGTCGGCCGCCG
CGCTGGTCCAGCACAGCCAGGCCACCGGCCTGCGCGCGCAGCAGGACAGCCTGACCGAGCGCGAGCGCGCGGTGATGCTG
CTGGTGGTCGAAGGACTGCCGAACAAGCTGGTCGCCGACCAGCTCGACATCAGCGTGCGGACCGTCGAAGTCCACCGGGC
CCGGGTTTTTGAGAAAATGGGCGTCAAGTCGGCCGTCGAGCTGGCCAATCTGCTGCGCAATCTGTAG

Protein sequence : 
MEPIHNATVYIVDDDKGVRDALAWLLRSRRLPSEAFASAEAFDARVAHGFEVRSPSCVLLDVRMGALSGLAMFEKLITYG
LLPTLPVIFLTGHADVPTAVDSVKRGAFDFFEKPFSDNALVDRIEQALVQSAAALVQHSQATGLRAQQDSLTERERAVML
LVVEGLPNKLVADQLDISVRTVEVHRARVFEKMGVKSAVELANLLRNL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ttrR CAB37412.1 TtrR Virulence SPI-2 Protein 6e-19 48
ttrR YP_216395.1 tetrathionate reductase complex: response regulator Virulence SPI-2 Protein 9e-19 48
ttrR NP_456141.1 putative two-component response regulator Not tested SPI-2 Protein 9e-19 48
ttrR NP_805058.1 two-component response regulator Virulence SPI-2 Protein 9e-19 48
ttrR NP_460352.2 response regulator Virulence SPI-2 Protein 9e-19 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pnap_3894 YP_984111.1 response regulator receiver protein VFG0488 Protein 3e-19 48