Gene Information

Name : Pnap_3871 (Pnap_3871)
Accession : YP_984088.1
Strain : Polaromonas naphthalenivorans CJ2
Genome accession: NC_008781
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 4124477 - 4125169 bp
Length : 693 bp
Strand : -
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: pol:Bpro_4632 two component transcriptional regulator, winged helix family

DNA sequence :
ATGAGAATCCTGGTGGTTGAAGACGATGCGGGCATTGCCGTCGGCCTGCGGACCAATCTGCAGCAGCGCGGCTATGCCGT
CGATGTGTGCGGCACGCTGGCCAGCGCCTGGGCGGCCCTGCGCAGCGAGCCTTTCGATCTGGTGCTGCTGGACCTGGGCC
TGCCCGATGGCGAGGGCGGCAGGCTTCTGGAGCGCGTCAGGCAGTCGCCCTCTGCAGCGGGCAGCCTGCCGGACACCTTG
ACGCCCATCCTCATCCTGACCGCGCGCGACCAGGTGGCTGACCGCATCTCGGGGCTGAACCTGGGGGCCGACGACTACCT
GGTCAAGCCTTTTGACCTCGATGAGCTTGAAGCCCGCATGCGCGCGCTGCTGCGCCGGGCCGCAGGCCGCGCCCATCCCC
TGCTGGCGCATGGCGACCTGGTGATCGACCCGGCGGCCCATAGCGTGCTGCGGGCCGGCCAGCCGGTCGAGCTGACGCCG
CGCGAATTTGCCTTGCTGCTGCTGTTGCTGGAGTCGCGCGGCCGGGTACTGTCACGCCAGCAGCTGGAGGCACGGCTTTA
CAGCTGGGACGATGGCGTCGGCAGCAATGCGGTCGAGGTGCATGTGCACCATGTGCGCCGCAAGCTCGGCGAAAGCCTGA
TCCAGACGGTGCGCGGCGTGGGCTATTTCATTCCCCGGGAAGACCTGCCATGA

Protein sequence :
MRILVVEDDAGIAVGLRTNLQQRGYAVDVCGTLASAWAALRSEPFDLVLLDLGLPDGEGGRLLERVRQSPSAAGSLPDTL
TPILILTARDQVADRISGLNLGADDYLVKPFDLDELEARMRALLRRAAGRAHPLLAHGDLVIDPAAHSVLRAGQPVELTP
REFALLLLLLESRGRVLSRQQLEARLYSWDDGVGSNAVEVHVHHVRRKLGESLIQTVRGVGYFIPREDLP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 7e-18 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pnap_3871 YP_984088.1 two component transcriptional regulator VFG0473 Protein 2e-21 45