Gene Information

Name : Pnap_3686 (Pnap_3686)
Accession : YP_983903.1
Strain : Polaromonas naphthalenivorans CJ2
Genome accession: NC_008781
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 3924324 - 3925019 bp
Length : 696 bp
Strand : +
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rfr:Rfer_1091 two component transcriptional regulator, winged helix family

DNA sequence :
ATGGCCCATCTACTGATTATTGAAGACGACGACCTGCTGCGCGACGGCTTGACCGACCTGCTCAAGCAAACCGGACATAC
CGTGTGCAACAGCGCGGACGGCCTGGCCGCGCAGACCTTGCTCAACGAACAGGTCATTGATGCGGTGCTGCTGGACCTGG
GCCTGCCCAGGCTCGACGGCATGTCCTTGCTGCGCTGGATTCGCCAGCGTTTTGAAAGCCTGCCGGTGATGATCCTGACC
GCCCGCGACGGCGTGAATGACCGCGTGGAGGGCTTGCTCGAAGGCGCCGACGACTACCTCACCAAGCCCTTCAACAACGC
CGAACTCAGCGCCCGCGTGCAGGCGCTGTTGCGCCGCGCCAGGCTGCCGGCCTTCAATACCGAGACCCGGGCCATCACCA
CGCCAGACGCCACGCAATGCCTGCAGATTGACAGCCAGCTGCCGCGCGCCTGGATTTTCGGCCAGGTCCACGACCTGACG
CAGCGCGAGTGGGAGTTGCTGACCTTGCTGCACCAGCGCCTGAACCAGGTGGTCAGCCGCGAGGACGTGGCCGCTGTCTG
GCAACACGAATCGGCCGAACCCACCGCATCCAACGCGCTGGAGGTGTACATCCACCGCTTGCGCCGAAAACTGCTGGGCT
CGGGCCTGAACATTCGCAATGTTCGCGGACTGGGCTACATGCTCGAACCCCTGTGA

Protein sequence :
MAHLLIIEDDDLLRDGLTDLLKQTGHTVCNSADGLAAQTLLNEQVIDAVLLDLGLPRLDGMSLLRWIRQRFESLPVMILT
ARDGVNDRVEGLLEGADDYLTKPFNNAELSARVQALLRRARLPAFNTETRAITTPDATQCLQIDSQLPRAWIFGQVHDLT
QREWELLTLLHQRLNQVVSREDVAAVWQHESAEPTASNALEVYIHRLRRKLLGSGLNIRNVRGLGYMLEPL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 1e-16 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pnap_3686 YP_983903.1 two component transcriptional regulator VFG0473 Protein 1e-17 43