Gene Information

Name : Pnap_3645 (Pnap_3645)
Accession : YP_983862.1
Strain : Polaromonas naphthalenivorans CJ2
Genome accession: NC_008781
Putative virulence/resistance : Unknown
Product : NusG antitermination factor
Function : -
COG functional category : K : Transcription
COG ID : COG0250
EC number : -
Position : 3880776 - 3881372 bp
Length : 597 bp
Strand : -
Note : KEGG: pol:Bpro_4447 NusG antitermination factor; TIGRFAM: transcription termination/antitermination factor NusG; PFAM: transcription antitermination protein NusG; KOW domain protein; SMART: NGN domain protein; KOW (Kyrpides, Ouzounis, Woese) domain protei

DNA sequence : 
ATGAGCGATCTGAACAATACGGTAGTCAGCGATGCTGTGGCCGATGCCTCCTTGGCGCTGACCCCTGGCATGCAGTGGTA
TGTTGTTCATGCCTATTCCGGCATGGAAAAAGCGGCTGAGCGTAATATTGTTGAGCGCATCAACCGTGCTGGCATGCAGT
CCAAGTTTGGCCGTTTTCTTGTGCCTACTGAAGAGGTGGTCGAGATCAAGAATGGCCAGAAAAAGACGACCGAACGTCGT
TTCTTCCCCGGCTATGTGCTTGTAGAAATGGTCATGGATGACGAAACCTGGCATTTGGTGAAGCACACCAATAAAGTCAC
TGGTTTTGTTGGCGGCGCGAAAAACCGTCCAGCCCCAATTTCTGAAGAAGAAGTGCAAAAGATCGTCAGTCAGATGCAGG
TGGGCACCGACAAGCCGCGCCACAAGGTCGAGTTTGAAGCGGGTGAATACGTCCGTGTCAAGGATGGTCCTTTCACTGAC
TTCAACGGTACGGTTGAAGAAGTGAACTACGAAAAGAACAAAGTTCGGGTGTCGGTCACGATCTTCGGACGGGCAACACC
GGTTGAGCTGGAGTTCAGTCAGATCGAAAAAACCTGA

Protein sequence : 
MSDLNNTVVSDAVADASLALTPGMQWYVVHAYSGMEKAAERNIVERINRAGMQSKFGRFLVPTEEVVEIKNGQKKTTERR
FFPGYVLVEMVMDDETWHLVKHTNKVTGFVGGAKNRPAPISEEEVQKIVSQMQVGTDKPRHKVEFEAGEYVRVKDGPFTD
FNGTVEEVNYEKNKVRVSVTIFGRATPVELEFSQIEKT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00341 YP_008207806.1 Transcription antiterminator Not tested AbaR25 Protein 8e-49 54
BJAB0868_00345 YP_008211671.1 Transcription antiterminator Not tested AbaR26 Protein 8e-49 54