Gene Information

Name : Pnap_3549 (Pnap_3549)
Accession : YP_983766.1
Strain : Polaromonas naphthalenivorans CJ2
Genome accession: NC_008781
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 3771296 - 3772063 bp
Length : 768 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rfr:Rfer_3186 ABC transporter related

DNA sequence :
ATGAGCGAAGCAAGCCTGCCGCTGATCCGCCTGCGCGGCATCACCAAGATGTATGGCGAAGGCGCGACCGCGCTGCTGGC
GCTCAAAGGCGTCGATCTGGACATAGCATCCGGCGATTTTGTCGCCATCATGGGGCCGAGCGGATCGGGCAAATCGACCG
CCATGAACACGCTCGGCTGCCTGGACACGCCGACCTCGGGCGAATACCTGTTCCAGGGCGTGCATGTCGAGTCGCTCTCG
CGCGACCAGCGCGCCCTGCTGCGGCGGCGCTTTTTCGGCTTTGTGTTCCAGGGCTTCAACCTGCTGGCGCGCACCTCGGC
GCAGGAAAACGTCGAGCTGCCGCTGCTCTACCGGGGCGAGGCCGCCGGCGCCCGCCACGCCAGCGCCGCCCGCGCGCTCG
ACCAGGTGGGCCTGAAGGGCTGGGAGCACCACCTGCCCTCCGAGTTGTCGGGCGGGCAGCAGCAGCGCGTGGCGATTGCG
CGCGCCATCGTCACCCAGCCGGCGGTGCTGCTGGCCGACGAGCCGACCGGCAACCTCGACACCCAGCGCAGCCGCGAGAT
CATGGAGTTGCTCTGGCGCCTGAACGCCGACCAGGGCATCACCGTGCTGATGGTCACGCACGAGCCCGACATGGCCGCCT
ATGCGCGGCGCATCGTGCGCTTTGTCGATGGCCTGGTGGAAAGCGATGTGCGCAACGAGCATCCCGCCGGACTCGAACAT
CCCGGCGCCGCCCTGCCCGTGGCCGCGCCCGTGGCGGAGGCCCGCTGA

Protein sequence :
MSEASLPLIRLRGITKMYGEGATALLALKGVDLDIASGDFVAIMGPSGSGKSTAMNTLGCLDTPTSGEYLFQGVHVESLS
RDQRALLRRRFFGFVFQGFNLLARTSAQENVELPLLYRGEAAGARHASAARALDQVGLKGWEHHLPSELSGGQQQRVAIA
RAIVTQPAVLLADEPTGNLDTQRSREIMELLWRLNADQGITVLMVTHEPDMAAYARRIVRFVDGLVESDVRNEHPAGLEH
PGAALPVAAPVAEAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 2e-22 43
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-23 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-24 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-24 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-24 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pnap_3549 YP_983766.1 ABC transporter-like protein NC_012469.1.7686878. Protein 2e-44 55
Pnap_3549 YP_983766.1 ABC transporter-like protein NC_008702.1.4606598. Protein 7e-34 50
Pnap_3549 YP_983766.1 ABC transporter-like protein CP001581.1.gene798.p Protein 5e-28 44