Gene Information

Name : Pnap_3334 (Pnap_3334)
Accession : YP_983552.1
Strain : Polaromonas naphthalenivorans CJ2
Genome accession: NC_008781
Putative virulence/resistance : Unknown
Product : phage integrase family protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0582
EC number : -
Position : 3530589 - 3531785 bp
Length : 1197 bp
Strand : -
Note : PFAM: phage integrase family protein; KEGG: pol:Bpro_0966 phage integrase

DNA sequence :
ATGCCCAAACTTCCCCGCGAGCTTAGCCCGATCGAGATAGGCCGTCTGAAAAGCGAAGGTGTGTATGCCGTGGGCGGCGT
GCCCGGGCTTTACCTGCAAATCATTGGTGGATCTCGTGCCTGGGTGCTGCGATTTGTGGTCGGCACGCGCCGCCGGCGCA
TGGGACTGGGCGGCTTTCCGGCCGTGACGCTGGCCCAGGCGCGGGACAAGGCACGGGCCGCGCGCGAGCTGATGGATCAG
GGCATCGACCCGATCCAGTCCCGGGAAGCGGTCATGCACAAGGCGGCTGCAGCGCGGGCTCGGGCCTTGACCTTCAGCAA
GGCGTCCGAGCAGTTCATCGCGGCGCGCGAGGCCGAATGGCGCAATGCCAAGCACCGCCAGCAGTGGGAAAACTCCCTGG
CCACGTATGCCAACCCGTTCATCGGTGAGATGGCCGTGTCAGAGATTGGCCAGGAAGACATCTTGAAGGTGCTTGAGCCG
ATCTGGCGCACGAAAACTGAAACAGCCTCTCGCGTGCGCGGCCGCATCGAGCAGATCCTGGACTGGGCCGCCGTGCGCGG
GCACCGGCGCGGCGAGAATCCGGCCCGCTGGACCGGCCACCTGGACAAGCTGCTGCCCAAGCCGTCCAAGATTGCGAAGG
TCGAGCACCATCCTGCTGTGGAAATAGGCGAGGCGCAGGCCGTGGTGCGGCGCATCGAGGCCTGCGCCGGCATGGGCGCC
CGGGCGCTGCTGTACCAGGTACTGACGGCGACCCGATCGGGCGAGGTGCGGGGAACGCTTTGGCAGGAAATCGACCTGGA
CGCCGGTGTGTGGAACATCCCCGAGAGCCGGATGAAGGCGCACAAGCCTCATCGGGTGTCACTCTCCAAGCAGGCCGTGC
AGCTGCTGCGCCTGCAGCCCAGGTTTGAGGACTGCGAGCTGGTGTTTCCGTCCACCAAGATGACGCCGCTGTCCGACATG
TCGCTGACGGCCGTCATGCGCCGGCTCAAACTCGACGCCGTACCGCACGGCTTTCGCTCCACCTTCAGCGACTGGGCCGC
CGAATGCACCAGCTACCCGAGGGACCTGGTGGAGATGGCCCTGGCCCATGCGATCGACAGCAAGGTCGAAGCCGCCTACC
GGCGCGGCGATATGCTGGCCAAGCGCGCCGCACTGATGCAGGCCTGGGCCGACTACTGCCTGCCGCAGCCGGGCTGA

Protein sequence :
MPKLPRELSPIEIGRLKSEGVYAVGGVPGLYLQIIGGSRAWVLRFVVGTRRRRMGLGGFPAVTLAQARDKARAARELMDQ
GIDPIQSREAVMHKAAAARARALTFSKASEQFIAAREAEWRNAKHRQQWENSLATYANPFIGEMAVSEIGQEDILKVLEP
IWRTKTETASRVRGRIEQILDWAAVRGHRRGENPARWTGHLDKLLPKPSKIAKVEHHPAVEIGEAQAVVRRIEACAGMGA
RALLYQVLTATRSGEVRGTLWQEIDLDAGVWNIPESRMKAHKPHRVSLSKQAVQLLRLQPRFEDCELVFPSTKMTPLSDM
SLTAVMRRLKLDAVPHGFRSTFSDWAAECTSYPRDLVEMALAHAIDSKVEAAYRRGDMLAKRAALMQAWADYCLPQPG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1120 NP_286655.1 P4 family integrase Not tested TAI Protein 4e-54 41
Z1559 NP_287063.1 P4 family integrase Not tested TAI Protein 4e-54 41