|
Name : Pnap_3308 (Pnap_3308) Accession : YP_983527.1 Strain : Polaromonas naphthalenivorans CJ2 Genome accession: NC_008781 Putative virulence/resistance : Unknown Product : phage tail sheath protein Function : - COG functional category : R : General function prediction only COG ID : COG3497 EC number : - Position : 3510544 - 3511719 bp Length : 1176 bp Strand : + Note : PFAM: phage tail sheath protein; KEGG: yps:YPTB1841 putative bacteriophage P2 tail sheath protein DNA sequence : ATGTCACTCGACCAGTACCATCACGGCGTCCGCGTTATCGAAATCAACGAAGGCACGCGGCCGATCCGGACCATCAACAC GTCGATCATCGGCCTCGTGGCCACGGCCAGCGATGCCGATGCCGCCGTCTTCCCGCTCAACAAGCCCGTCCTGATCACCA ACGTCTACAGCGCCATGGCCAAGGCCGGCACGCTGGGCACCCTGGCCAGGTCGCTCGACGCCATCGCATCGCAGGCCCGC CCTCTGACCGTCGTCGTGCGCGTGGCCGAAGGGGTTGACGATGCAGCCACCACCACCAACGTCATCGGCGGCGTCAATGG CAGCGGCCAGTACACCGGCATGAAGGCCCTGCTCGCCGCCCAGGCCCAGCTCGGCGTCAAGCCGCGCATCCTCGGCGCCC CCGGCCTGGACAACCAGGCCGTCACCGTCGCCCTGGTGGCACTGGCCCAGCAGCTGCGCGGCTTTGCCTACGCCGGCTGC GACGAAGCCGACACCATCCCCGAAGCCGTGCTCTACCGCGAAGAATTCGCCGCGCGCGAACTGATGCTCATCTACCCCGA CTTCATGGCCTGGAACGGCATCGCCAACGCTGCAGCGCCCGCCGTCGCCTACGCCCTGGGCCTGCGCGCCAAGATCGACA ACGAAGTCGGCTGGCACAAGACCCTGTCCAATGTGGCGGTCAACGGCGTCACCGGCATCAGCAAGGACGTGTTCTGGGAT CTGCAGAGCGCCGACACCGATGCCGGCGTGCTCAATGCCGCCGACGTCACCGCCCTGATCAACAGCGGCAGCGGCTACCG CTTCTGGGGTTCGCGCACCTGCAGCGATGATCCGCTGTTCGCCTTCGAGTCCGCCACCCGCACTGCCCAGGTGCTGGCCG ACACTGTCGCCGAGGCGCACCTGTGGGCGGTGGACAAGCCGCTGCACCCGAGCATCGTCAAGGACATCCTGGAGGGCGTC AACGCCAAGTTCCGCAGCCTCAAAAACGGCGGCTACATCCTGGACGGTTCTGCCTGGTACGACGAAGAGATCAACACCAC CACCACGCTCACGGCTGGCCAGCTCGTCATCGACTACGACTTCACGCCCCTGCCCCCGATCGAGGACCTCACGTTCCGCC AGCGCATCACCGACCGCTACTTCGCCGACTTCGCCTCTCAAGTCGCCGGCGCCTGA Protein sequence : MSLDQYHHGVRVIEINEGTRPIRTINTSIIGLVATASDADAAVFPLNKPVLITNVYSAMAKAGTLGTLARSLDAIASQAR PLTVVVRVAEGVDDAATTTNVIGGVNGSGQYTGMKALLAAQAQLGVKPRILGAPGLDNQAVTVALVALAQQLRGFAYAGC DEADTIPEAVLYREEFAARELMLIYPDFMAWNGIANAAAPAVAYALGLRAKIDNEVGWHKTLSNVAVNGVTGISKDVFWD LQSADTDAGVLNAADVTALINSGSGYRFWGSRTCSDDPLFAFESATRTAQVLADTVAEAHLWAVDKPLHPSIVKDILEGV NAKFRSLKNGGYILDGSAWYDEEINTTTTLTAGQLVIDYDFTPLPPIEDLTFRQRITDRYFADFASQVAGA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABR13484.1 | putative tail sheath protein | Not tested | PAGI-6 | Protein | 5e-110 | 69 |
| STY4607 | NP_458690.1 | probable major tail sheath protein | Not tested | SPI-7 | Protein | 2e-107 | 65 |
| t4301 | NP_807898.1 | major tail sheath protein | Not tested | SPI-7 | Protein | 2e-107 | 65 |
