Gene Information

Name : hemC (Pnap_3090)
Accession : YP_983310.1
Strain : Polaromonas naphthalenivorans CJ2
Genome accession: NC_008781
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0181
EC number : 2.5.1.61
Position : 3263928 - 3264923 bp
Length : 996 bp
Strand : -
Note : transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis

DNA sequence :
GTGGCAGCAGCGCTTCAAACTTTTCCTTCAACGCTCAAGGTGGTCATTGCCACGCGCGAAAGCCGCCTGGCGATGTGGCA
GGCCGAGCATGTCAAGGCGCTGCTTGAGTCGCGCCTGGGCTGGCAGGTCGAGCTGCTGGGCATGACGACCCTGGGCGACC
AGATCCTGGACCGCTCGCTGAGCAAGGTCGGCGGCAAGGGCCTGTTCGTCAAGGAGCTGGAAGTCGCGCTGAGCGAAGGC
CGGGCCGACCTGGCGGTGCATTCGCTGAAAGACGTGCCGATGGACCTGCCCGAAGGCTTCGCGCTGGCCTGCGTCCTGGA
GCGCGAAGACCCGCACGATGCCTTTGTGTCCAATGATTTTGCGTCGCTGGCCGAGTTGCCGCCCGGCGCGGTGGTCGGCA
CCTCCAGCCTGCGCCGGCTGGTGCTGCTCAAGGCGCTGCGGCCCGACCTCGCCATCCAGCCCCTGCGCGGCAACCTCGAT
ACGCGCCTGCGCAAGCTCGACGAGGGCCAGTACCAGGCCATCGTGCTGGCCGCCGCCGGGCTCAAGCGGCTGGGCCTCGA
ATCGCGCATTCGCCACACGTTCGCGCCCACCGACATGCTGCCGGCGGCCGGGCAGGGCGCGCTGGGCATCGAAGTGCGGG
CCGACCGCGCCGACCTCATCGCCGCGCTGGCCACGCTGGCGCACCAGCCGACCTGGCTGGCGGTCACGGCCGAGCGCACC
GTCTCGCGCGCCATGGGCGGCAGCTGCTCGATGCCGCTGGCCGCTTTCGTGACCGCCGGCAGCGATGGCGCCTTGCAGCT
CGACGCCGCCTGGGGCGACCCGGCCACGGCCGATGCGTCTTCCGGCGTTTCAGCGGTGTTGCCCGCGCCGCTGGTGCAGG
TGCGGCAAACCGCCGTGGTGCGCAGCTTTGCCGAGGCCGAGGCGCTGGGCGACGCGGTGGCGGCGCAACTGCGCGCCGGC
GGCGCGGTCTGGGCCAGCAACGCGCCAGCGGCTTGA

Protein sequence :
MAAALQTFPSTLKVVIATRESRLAMWQAEHVKALLESRLGWQVELLGMTTLGDQILDRSLSKVGGKGLFVKELEVALSEG
RADLAVHSLKDVPMDLPEGFALACVLEREDPHDAFVSNDFASLAELPPGAVVGTSSLRRLVLLKALRPDLAIQPLRGNLD
TRLRKLDEGQYQAIVLAAAGLKRLGLESRIRHTFAPTDMLPAAGQGALGIEVRADRADLIAALATLAHQPTWLAVTAERT
VSRAMGGSCSMPLAAFVTAGSDGALQLDAAWGDPATADASSGVSAVLPAPLVQVRQTAVVRSFAEAEALGDAVAAQLRAG
GAVWASNAPAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 3e-58 57
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 3e-58 57