Gene Information

Name : Pnap_3013 (Pnap_3013)
Accession : YP_983233.1
Strain : Polaromonas naphthalenivorans CJ2
Genome accession: NC_008781
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : 1.2.1.3
Position : 3180309 - 3181829 bp
Length : 1521 bp
Strand : +
Note : PFAM: aldehyde dehydrogenase; KEGG: eba:ebA2242 aldehyde dehydrogenase

DNA sequence :
ATGATTTACGCCAACCCCGGCTCCGCCGGCGCCCCCGTCAACTTCAAGGCTCAGTACGACAACTTCATCGGCGGCAAGTT
TGTCGCCCCGCTCAACGGCGCCTATTTCGACGTCATCACCCCCATCACCGGCCAGCCCTACACCAAGGCAGCCCGCTCCG
GCGCCGAAGACATCGAACTGGCGCTCGACGCAGCGCATGCCGCCGCCGGCGCATGGGGCAAGACACCAGCGGCCGAGCGC
GCCAACGTGCTGCTCAAGATCGCCGACCGCATCGAGCAAAACCTCGAAGCACTGGCCTACGCCGAAACCGTTGACAACGG
CAAGGCCATCCGCGAAACCCTGAATGCCGACATCCCGCTGACGGCCGACCATTTCCGCTACTTTGCCGGTTGCCTGCGCT
CGCAGGAAGGCAGCCTCTCCGAAATCGACGGCGACACCATCGCCTACCATTTCCATGAGCCTTTGGGCGTCGTCGGCCAG
ATCATTCCGTGGAACTTCCCGATCCTGATGGCCGCCTGGAAGCTCGCCCCCGCCATTGCCGCCGGCAACTGCGTGGTCTT
GAAGCCCGCCGAATCGACGCCGGTTTCCATCCTGATTCTGGCCGAATTCATTGCCGACCTGCTGCCGCCCGGCGTGCTCA
ACATCGTCAATGGCTATGGCCGCGAAGCCGGCATGCCGCTGGCCACCAGCAAGCGCATCGCCAAGATCGCCTTCACCGGC
TCCACCGCCACCGGCCGCGTGATTGCGCAGGCAGCGGCCACCAACCTGATCCCGGCCACGCTGGAACTCGGCGGCAAGTC
GCCCAACATCTTCTTTGCCGACATCGCCGACGCCGACGACGCATTTTTCGACAAGGCCATCGAAGGCATGGTGCTGTTTG
CCTTCAACCAGGGCGAAGTCTGCACCTGCCCTTCACGCGCGCTGATCCAGGAATCGATCTACGACAAGTTCATGGCACGC
GTGCTCGAACGTGTCGCAGCCATCAAGCAGGGCAGCCCGCTCGATACCGACTGCATGATGGGTGCCCAGGCGTCGATGGA
GCAGATGAAGAAGATCGAGGCCTACCTGGCCATCGGCAAGGAAGAAGGCGCCGAGCTGCTGATTGGCGGCGCACGCGCCC
ACCTGGAAGGCGACCTGGCCGACGGCTACTACATCCAGCCGACGCTGTTCAAGGGCCACAACAAGATGCGCATCTTCCAG
GAAGAAATCTTCGGCCCGGTGCTGGCCGTGACCACCTTCAAGGACGAAGCCGAAGCGCTGGAAATCGCCAACGACACGCC
TTACGGCCTGGGCGCCGGCGTCTGGACGCGTGATGGCGCCACCGCCTATCGCATGGGCCGCGCCATCCAGGCCGGCCGCG
TCTGGACCAACTGCTACCACGCCTACCCGGCCCACGCCACCTTCGGCGGCTACAAGGAATCGGGCATCGGCCGCGAGACC
CACAAGGTCATGCTCGACCACTACCAGCAAACCAAGAACCTGCTGGTCAGCTACAGTCCCAAAGCACTGGGCTTCTTCTA
A

Protein sequence :
MIYANPGSAGAPVNFKAQYDNFIGGKFVAPLNGAYFDVITPITGQPYTKAARSGAEDIELALDAAHAAAGAWGKTPAAER
ANVLLKIADRIEQNLEALAYAETVDNGKAIRETLNADIPLTADHFRYFAGCLRSQEGSLSEIDGDTIAYHFHEPLGVVGQ
IIPWNFPILMAAWKLAPAIAAGNCVVLKPAESTPVSILILAEFIADLLPPGVLNIVNGYGREAGMPLATSKRIAKIAFTG
STATGRVIAQAAATNLIPATLELGGKSPNIFFADIADADDAFFDKAIEGMVLFAFNQGEVCTCPSRALIQESIYDKFMAR
VLERVAAIKQGSPLDTDCMMGAQASMEQMKKIEAYLAIGKEEGAELLIGGARAHLEGDLADGYYIQPTLFKGHNKMRIFQ
EEIFGPVLAVTTFKDEAEALEIANDTPYGLGAGVWTRDGATAYRMGRAIQAGRVWTNCYHAYPAHATFGGYKESGIGRET
HKVMLDHYQQTKNLLVSYSPKALGFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 3e-137 66
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 8e-146 65
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 8e-146 65
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 8e-146 65
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 4e-145 65

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pnap_3013 YP_983233.1 aldehyde dehydrogenase VFG0082 Protein 1e-137 66