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Name : Pnap_2643 (Pnap_2643) Accession : YP_982866.1 Strain : Polaromonas naphthalenivorans CJ2 Genome accession: NC_008781 Putative virulence/resistance : Unknown Product : phage integrase family protein Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0582 EC number : - Position : 2785967 - 2787208 bp Length : 1242 bp Strand : + Note : PFAM: phage integrase family protein; KEGG: tbd:Tbd_0943 putative integrase prophage protein DNA sequence : ATGCCGCTGACCGACATCTTCACCAAGAACACCAAGCACAGCGGCGCGCCTGCTGGCGACAAGCACACCGACGGCGGCGG CATGTACCTGCTGGTGACCAAGGCCGGAAAATACTGGCGCATGAATTACCGCTTCGCAGGCAAGCGCAAGACCCTGGCGC TTGGCGTGTACCCGGCGGTATCGCTGGCTGAAGCCCGGCAGGGACGCGACAAGGCCCGCAAGCTGCTGGCCCAAGACATT GACCCCAGCGCAGCCAAACAAGAGGACAGGCAGGCCACGGCGACGGCGGCGGCAAACACCTTTGAAGCCGTGGCGCGGGA GTTCCACGCGCTCAAGGCCGGAGGATGGAGCGAGGGCCACGCGACCAAGTGGCTGCGCATGAACGAGCTGTACCTGTTCC CGCATATCGGCACCCTGCCCTTGTCCACGATCAAGGCACCGACCCTGTTGGCCGCGCTGCGCAAGGTGGAGAAGAAAGGC ATTCTCAGCACCGCGCAGGATCTGCAGGCCATGGCCGGGCAGGTGTTCCGCTATGGGGTACAGACCGGACGCTGCGAGAG CAACCCCGGCGTTGACCTGAAAGGCGCATTGCAACCCCACATCGCCAAGCACTTTGCCGCCATCCTTGACCCGGTAGAGG CTGGTGCAATGCTGCGCGCCATCGACGCCTACACGGGCCAGCCTGAGACGCTGGCAGCGTTGAAACTGTCGGCACTGTTC TTTCAGCGGCCCGGGAACATTCGTGCGATGGAATGGGCATGGATTGACTTGGATGGACAAATGTTGACCATCCCGGCCAA GAGCATGAAAAGTTCAAAGCATGAAAAGGCGAACGGCAAGCCTCATACCGTCCCGCTGGCACGTCAGGCGCTGGACGTGC TCAAGTCGATCAAGCAACTCACCGGGCACGGGCGTTATGTGTTTCCTGGGGCGCGCACTGGCGAGAGACCCATGAGCGAC GGCACCATCAATGCGGCGCTGCGGCGATTGGACTACGGCAACAACGAGCATGTAGCGCACGGCTTCCGGGCGATGGCCCG AACGATGATGGCAGAGCGCCTGTCGGGCATCCCGCAAGACATGGTGGAGGCTCAGTTGGGACACGGAAAGAAAGGCCCGC TGGGCAGTGCCTACGACCGCTCAGAGTACCTGCCCCAGCGCCAACAGATGATGCAGACGTGGGCAGACTACCTGGACAAG CTGCGCACGGGGGCTGAGGTGATCCAGTTCAAGGCGGCTTGA Protein sequence : MPLTDIFTKNTKHSGAPAGDKHTDGGGMYLLVTKAGKYWRMNYRFAGKRKTLALGVYPAVSLAEARQGRDKARKLLAQDI DPSAAKQEDRQATATAAANTFEAVAREFHALKAGGWSEGHATKWLRMNELYLFPHIGTLPLSTIKAPTLLAALRKVEKKG ILSTAQDLQAMAGQVFRYGVQTGRCESNPGVDLKGALQPHIAKHFAAILDPVEAGAMLRAIDAYTGQPETLAALKLSALF FQRPGNIRAMEWAWIDLDGQMLTIPAKSMKSSKHEKANGKPHTVPLARQALDVLKSIKQLTGHGRYVFPGARTGERPMSD GTINAALRRLDYGNNEHVAHGFRAMARTMMAERLSGIPQDMVEAQLGHGKKGPLGSAYDRSEYLPQRQQMMQTWADYLDK LRTGAEVIQFKAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| int | AAD44730.1 | Int | Not tested | SHI-2 | Protein | 5e-57 | 41 |
| STY4821 | NP_458899.1 | integrase | Not tested | SPI-10 | Protein | 5e-55 | 41 |
