Gene Information

Name : Pnap_2522 (Pnap_2522)
Accession : YP_982746.1
Strain : Polaromonas naphthalenivorans CJ2
Genome accession: NC_008781
Putative virulence/resistance : Unknown
Product : IS66 Orf2 family protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3436
EC number : -
Position : 2657188 - 2657541 bp
Length : 354 bp
Strand : -
Note : PFAM: IS66 Orf2 family protein; KEGG: reu:Reut_C6378 IS66 Orf2 like

DNA sequence : 
GTGTTCGCGCTGAACGCCAGCCGCGCGGTATACCTGCACCGGGACGCCATTGATTTTCGCAAGAGCATCAACGGCCTGGC
CAGCCTGGTCGAGCATGGCCTGGGTCTGGACGCGTTTGCCGAGGCGCTGTTCGTCTTTGCCAACCGCAGGCGCGACCGCA
TCAAGATTTTGGGCTGGGATGTCAACGGGTTCTGGCTCCTGCACAAGCGCCTGGAGAAAGACCGCTTCATCTGGCCGCGA
GGCGAGGCGGGCGTCGTGACGCTCAGCGTGGAGCAGTTGCACTGGCTGCTCAAGGGCGTGGACATCCAGGCCCTGCGCGG
ACACCGGGCGGTGAGTTATCAGCGCGCGGCGTGA

Protein sequence : 
MFALNASRAVYLHRDAIDFRKSINGLASLVEHGLGLDAFAEALFVFANRRRDRIKILGWDVNGFWLLHKRLEKDRFIWPR
GEAGVVTLSVEQLHWLLKGVDIQALRGHRAVSYQRAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAF71493.1 unknown Not tested Hrp PAI Protein 7e-19 48
aec52 AAW51735.1 Aec52 Not tested AGI-3 Protein 5e-13 44
unnamed ADD91739.1 hypothetical protein Not tested PAI-I AL862 Protein 5e-13 44
pB171ORF50 CAD66190.1 ORF50 protein of pB171 Not tested PAI III 536 Protein 1e-12 43
Z1160 NP_286695.1 hypothetical protein Not tested TAI Protein 6e-12 43
Z1599 NP_287103.1 hypothetical protein Not tested TAI Protein 6e-12 43
Z4338 NP_289563.1 hypothetical protein Not tested OI-122 Protein 3e-11 41
ECUMN_3364 YP_002414037.1 putative transposase ORF2, IS66 family Not tested Not named Protein 1e-11 41
ECO103_3567 YP_003223430.1 hypothetical protein Not tested LEE Protein 3e-11 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pnap_2522 YP_982746.1 IS66 Orf2 family protein VFG1665 Protein 5e-13 43
Pnap_2522 YP_982746.1 IS66 Orf2 family protein VFG1737 Protein 3e-12 41