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Name : Pnap_2391 (Pnap_2391) Accession : YP_982619.1 Strain : Polaromonas naphthalenivorans CJ2 Genome accession: NC_008781 Putative virulence/resistance : Unknown Product : replicative DNA helicase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0305 EC number : - Position : 2523320 - 2524729 bp Length : 1410 bp Strand : - Note : KEGG: rfr:Rfer_2580 replicative DNA helicase; TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase, N-terminal domain protein; DnaB domain protein helicase, C-terminal domain protein; SMART: AAA ATPase DNA sequence : ATGTCTGCCGTACTTTCCCCTTTTTCCGAATCCGGTTACAGCGCCGACCGCCAGATTGCCCAGCTTCGCATCCCACCGCA CTCGATAGAAGGTGAGTCCAGCGTTTTGGGCGGCCTGTTGCTCGACAACAGTGCATGGGACCGTGTGGGCGACTTGCTGG CAGACCAGGATTTTTACCGCCACGAGCATCAGCTTATTTATGCCGCCATCGGATGGCTGATCAATGCGTCCAAGCCTGCG GACATCATCACCGTCTTTGAGCGCCTGCAGAGCCTGGGGAAAAATGAAGAAATAGGTGGCTTGAGCTACCTGAGTGCACT GGCCCAATACGTACCGAGCGCCAGCAACATCCGTCGCTATGCCGAAATTGTTCGGGAGCGCTCTATCTTGCGCAAGCTGG TCGCCGCCTCCGACGAGATTGCCACCAATGCCTTCAATCCGCAAGGCAAGGCCGTCACTGTCATTCTGGATGAAGCCGAG CAAAAGATTCTCAACATCGGCGAGCAGGGCGGCCGATCGCAGCAGGGTTTTCAAAGCATGGACACGCTGGTGGTGGATTT GCTCGACCGCGTTACCGAGATGTCGGAAAACCCGAATGACGTGACCGGCGTGCCGACTGGATTTGTTGACCTGGACCGCA TGACCTCCGGCTTTCAGGCGGGTGATCTGATTATTCTGGCGGCACGGCCGTCAATGGGTAAAACGGCGCTGGCCATCAAC ATCGCCGAGCATGTGGCCTTGCATGAAGGCTTGCCGGTAGCGGTGTTCTCGATGGAAATGGGTGCCTCGCAGCTGGCCGT GCGTATCGTCGGTTCGATTGGCCGGATCGACCAGACTCACTTGCGCACGGGCGCCTTGACCGACGAGGAGTGGCCGCGCC TGACCGAAGCCATCGAAAAGCTGCGGACGATTTCCCTGCATATCGACGAAACCGCCGGCCTCACGGTCAGCGAACTGCGG GCCAATGCAAGGCGCCTTGCCCGCCAGTGCGGCAAGCTAGGCCTGATCGTGGTGGATTACCTGCAACTCATGAGCGTATC GACCAGCATGAGCGATGAAAACCGGGCGACTGCCGTGGGCGAAATTTCACGTGGTTTGAAGATGCTCGCCAAAGAATTGC AATGCCCGGTCATTGCGCTGTCGCAGCTCAGCCGGGGTGTGGAATCGCGCACCGACAAGCGGCCGATGATGAGCGACCTG CGCGAATCGGGTGCGATTGAGCAGGATGCCGACATCATCATGTTCATTTACCGCGATGAGTACTACACCAAGGAAGCATG CAAAGAGCCGGGCGTGGCCGAGGTCATCATCAGCAAGCAGCGCAATGGTCCGACGGGAACGGTAAAACTGGCGTTTATCA ACCGCATCACCAAATTTGAAAGCCTGGCTCATAATGCCGGAGATTTTTAA Protein sequence : MSAVLSPFSESGYSADRQIAQLRIPPHSIEGESSVLGGLLLDNSAWDRVGDLLADQDFYRHEHQLIYAAIGWLINASKPA DIITVFERLQSLGKNEEIGGLSYLSALAQYVPSASNIRRYAEIVRERSILRKLVAASDEIATNAFNPQGKAVTVILDEAE QKILNIGEQGGRSQQGFQSMDTLVVDLLDRVTEMSENPNDVTGVPTGFVDLDRMTSGFQAGDLIILAARPSMGKTALAIN IAEHVALHEGLPVAVFSMEMGASQLAVRIVGSIGRIDQTHLRTGALTDEEWPRLTEAIEKLRTISLHIDETAGLTVSELR ANARRLARQCGKLGLIVVDYLQLMSVSTSMSDENRATAVGEISRGLKMLAKELQCPVIALSQLSRGVESRTDKRPMMSDL RESGAIEQDADIIMFIYRDEYYTKEACKEPGVAEVIISKQRNGPTGTVKLAFINRITKFESLAHNAGDF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABR13456.1 | replicative DNA helicase | Not tested | PAGI-5 | Protein | 3e-89 | 48 |
| STY4522 | NP_458617.1 | DNA helicase | Not tested | SPI-7 | Protein | 4e-75 | 45 |
| t4227 | NP_807829.1 | DNA helicase | Not tested | SPI-7 | Protein | 4e-75 | 45 |
| dnaB | CAI36044.1 | replicative DNA helicase DnaB | Not tested | PPHGI-1 | Protein | 3e-79 | 44 |
| PMI2640 | YP_002152342.1 | DNA helicase | Not tested | Not named | Protein | 3e-74 | 44 |
| api2 | CAF28476.1 | putative DNA binding protein with DNA-dependent ATPase activity | Not tested | YAPI | Protein | 8e-82 | 44 |
| dnaB2 | YP_001402701.1 | replicative DNA helicase | Not tested | YAPI | Protein | 2e-81 | 44 |
| dnaB2 | YP_001007676.1 | putative DNA helicase | Not tested | YAPI | Protein | 5e-81 | 43 |
