Gene Information

Name : Pnap_2302 (Pnap_2302)
Accession : YP_982531.1
Strain : Polaromonas naphthalenivorans CJ2
Genome accession: NC_008781
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2440683 - 2441414 bp
Length : 732 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rfr:Rfer_1942 ABC transporter related

DNA sequence : 
ATGGCCAATCCAGATGCGCAGCCGCCGGGCGCTCCGGTGCTGCGCATCCGCTCGCTGTGCAAGACTTATGGCAGCGGCGA
GTCGGCGGTGCATGCGCTACGCGACATCAGCCTTGACGTGCGCAGCGGAGAATTCGTGGTATTGCTGGGCGCGTCGGGCA
GCGGCAAGTCCACCCTGCTCAACATCCTGGGCGGCCTGGACATCCCCACCAGCGGCGAGATCGAGTTTTTCGAGCATCGC
CTGACCCATGCGACGGACGAAGAACTGACCGTGTATCGCCGCGAGCATGTGGGCTTCGTGTTCCAGTTCTACAACCTCAT
TCCCAGCCTGACGGTGCGGGAAAACGTGGCCCTGGTCACCGACATCGCCGACAACCCGATGCCCGTGGACGAGGCGCTGG
CGCTGGTCGCCCTGACGCAGCGGCGCGACCATTTCCCGTCCCAGTTGTCGGGCGGCGAGCAGCAGCGCGTGGCCATCGCG
CGGGCCATCGTCAAACGCCCCCAACTGCTGCTGTGCGACGAGCCGACCGGCGCGCTGGACTATGCCACCGGCAAGATGGT
GCTGGAAGTCATTGCCAACATCAATGCCGGACTGGGAACAACGGCCATCGTGATCACCCACAACGCGGCCATCGCCGGCA
TGGCGGACCGCGTGATTCGCCTGGTCGATGGGCGCATTGCCAGCATCGAGACGCCGGCCCGGCGGCTGACGCCGGCCGAG
TTGTCGTGGTGA

Protein sequence : 
MANPDAQPPGAPVLRIRSLCKTYGSGESAVHALRDISLDVRSGEFVVLLGASGSGKSTLLNILGGLDIPTSGEIEFFEHR
LTHATDEELTVYRREHVGFVFQFYNLIPSLTVRENVALVTDIADNPMPVDEALALVALTQRRDHFPSQLSGGEQQRVAIA
RAIVKRPQLLLCDEPTGALDYATGKMVLEVIANINAGLGTTAIVITHNAAIAGMADRVIRLVDGRIASIETPARRLTPAE
LSW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-34 46
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-35 45
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-35 45
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-35 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pnap_2302 YP_982531.1 ABC transporter-like protein NC_012469.1.7685735. Protein 1e-50 49
Pnap_2302 YP_982531.1 ABC transporter-like protein CP001581.1.gene798.p Protein 7e-44 47
Pnap_2302 YP_982531.1 ABC transporter-like protein NC_008702.1.4606598. Protein 3e-32 46
Pnap_2302 YP_982531.1 ABC transporter-like protein CP001581.1.gene598.p Protein 3e-40 42
Pnap_2302 YP_982531.1 ABC transporter-like protein NC_012469.1.7686946. Protein 9e-23 42