Gene Information

Name : Pnap_2225 (Pnap_2225)
Accession : YP_982454.1
Strain : Polaromonas naphthalenivorans CJ2
Genome accession: NC_008781
Putative virulence/resistance : Virulence
Product : ATPase
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 2374721 - 2377324 bp
Length : 2604 bp
Strand : -
Note : PFAM: AAA ATPase, central domain protein; Clp N terminal domain protein; ATPase associated with various cellular activities, AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; KEGG: pol:Bpro_2201 ATPase AAA-2

DNA sequence :
ATGCGACAAGACAAACTCACCACCAAGTTCCAGGAAGCCCTGAGCGACGCCCAGTCGCTGGCGCTGGGCAACGACAACGG
CTATATCGAGCCGGCGCACCTGCTGGCGGCGATGCTGCGCCAGGAAGACGGTCCGCGCGCGCTGCTGGAGCGGGCTGGCG
TCAACGTCAACGGCTTGATGCAGGCGGCCGATGCAGCGGTCAAGAAACTGCCGCAGGTGCAGGGCCAGGACCAGATCCAG
GTCGGCCCCGAATTGGCCAAGCTGCTGCAGGCCACTGAAAAGGAATCCATCAAGCGCAATGACCAGTTCATTGCCGGTGA
GCTGTTTTTGCTCGCCCTGACCGACAGCAAGGCCGACGTGGGCAAGATTGCCCGCGAAAACGGCTTGAGCCGCAAGGCGC
TGGAAGCGGCGATTGACGCCGTGCGCGGCGGCCAGAACGTCAACAGCGCCGACGCCGAAGGCCAGCGCGAAGCCCTGAAA
AAATACTGCATGGACCTGACAGAGCGCGCGCGCCTGGGCAAGCTCGACCCGGTGATTGGCCGCGACGATGAGATCCGCCG
CGCCATCCAGGTCTTGCAGCGCCGCACCAAGAACAATCCCGTCCTGATCGGCGAGCCCGGCGTCGGCAAGACGGCGATTG
TCGAAGGCCTGGCCCAGCGCATCGTCGCCGGCGAGGTGCCCGATTCGCTCAAGGGCAAGCGCGTGCTGTCGCTCGACATG
GCCGCGCTGGTGGCCGGCGCCAAGTTCCGCGGCGAGTTCGAGGAACGGCTGAAAACCGTGCTCAATGAACTGGCCAAGGA
AGAAGGCCAGACCATCGTCTTCATCGACGAGTTGCACACCATGGTCGGCGCGGGCAAGGCCGAGGGCGCGATGGATGCGG
GCAACATGCTCAAGCCGGCGCTGGCGCGCGGCGAGTTGCACTGCGTCGGCGCGACCACGCTCGACGAATACCGCAAGTAC
ATCGAAAAAGACGCCGCGCTGGAGCGCCGCTTCCAGAAAATCCTGGTCGGCGAGCCGACCGTTGAGGCGACGATTGCCAT
TCTGCGCGGCCTGCAGGAAAAGTACGAAACCCACCACGGCGTGCAGATCACCGACCCGGCCATCGTCGCGGCGGCCGAAC
TCAGCCACCGCTACATCACCGACCGCTTCCTGCCCGACAAGGCGATTGACCTGATCGACGAGGCCGCCGCCAAGGTCAAG
ATCGAGATCGACTCCAAGCCCGAGGTCATGGACCGGCTCGACCGCCGGCTGATCCAGTTGCAGATCGAGCGCGAAGCCGT
GCGCCGCGAAAAGGACGAAGCCTCGCAAAAGCGCTTTGGCCTGATCGAGGAGGAAATCGGCAAGCTGCAAAAGGAAATCT
CCGACATGGATGAAATCTGGCAGGCCGAGAAAGCCCAGGCGCTGGGCTCCAAGGACGTGATGGAGGAAATCGACACCATC
AACACGCAGATCGAGGAATTCACCCGCAAGGGCGACTTCAACAAGGTGGCCGAACTGCAGTACGGCAAGCTGCCCGAGCT
AAAAAAGCGCCTCAAGCAGGCGCAGGACACCGAGGAGAGCAAAGGCGTGGACGACAAGCCCCGGCTGCTGCGCACGCAGG
TCGGCGCCGAGGAAATCGCCGAAGTCGTGAGCCGCGCCACGGGCATTCCGGTGGCCAAGATGATGCAGGGCGAAAAAGAC
AAGCTGCTGCAGATGGAAGGCAAGCTGCACGAGCGCGTGGTCGGCCAGGACGAGGCGATTGGCGCGGTGGCCAACGCGAT
TCGCCGCTCGCGCTCGGGCCTCTCGGACCCGAACCGGCCAACGGGTTCATTCCTGTTCCTTGGCCCCACGGGCGTCGGCA
AGACCGAGCTGTGCAAGGCGCTGGCCGGCTTTCTGTTCGACAGCGAAGACCATCTGGTCCGCATCGACATGAGCGAGTTC
ATGGAAAAGCATTCGGTCGCCCGCCTGATCGGCGCGCCGCCGGGCTACGTGGGCTACGAGGAGGGCGGCTACCTGACCGA
AGCGGTGCGCCGCAAGCCTTACAGCGTGCTGCTGCTCGACGAGGTCGAAAAAGCGCACCCGGACGTGTTCAACGTGCTGC
TGCAGGTGCTGGATGATGGCCGGCTGACCGATGGCCAGGGGCGCACGGTCGATTTCAAGAACACCGTGATCGTCATGACC
AGCAACATCGGCTCGCCGATCATCCAGTCGATGGTCGGCCAGCCGTATGAGGAGATCAAGGACGCGGTCACCGACGAGTT
GAAGAACTATTTCCGACCCGAGTTTTTGAACCGCATCGACGAGACGGTCGTGTTCCATGCGCTCGACGCGAAGAACATCG
AGTCGATTGCCCGCATCCAGCTCAAGGTGCTCCTGGCCCGCCTGGCCAAGATGGACCTGGTGCTCGACGTGTCGGAAGCG
GCGATTGGCGAGCTGGCCAAGGTCGGGTTCGACCCGGTGTTCGGCGCGCGGCCGCTCAAGCGCGCGATCCAGCAGCGGAT
TGAAAACCCGCTGTCAAAACTGCTGCTGGAAGGCCGTTTTCCGCCCAAGAGCACCATTCACGTCGATGTGGACCCGATCC
TCAATCCGGGCGTGTTCAGGTTTGGCGAGGCGCAGCCAGCCTGA

Protein sequence :
MRQDKLTTKFQEALSDAQSLALGNDNGYIEPAHLLAAMLRQEDGPRALLERAGVNVNGLMQAADAAVKKLPQVQGQDQIQ
VGPELAKLLQATEKESIKRNDQFIAGELFLLALTDSKADVGKIARENGLSRKALEAAIDAVRGGQNVNSADAEGQREALK
KYCMDLTERARLGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGEVPDSLKGKRVLSLDM
AALVAGAKFRGEFEERLKTVLNELAKEEGQTIVFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRKY
IEKDAALERRFQKILVGEPTVEATIAILRGLQEKYETHHGVQITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAAAKVK
IEIDSKPEVMDRLDRRLIQLQIEREAVRREKDEASQKRFGLIEEEIGKLQKEISDMDEIWQAEKAQALGSKDVMEEIDTI
NTQIEEFTRKGDFNKVAELQYGKLPELKKRLKQAQDTEESKGVDDKPRLLRTQVGAEEIAEVVSRATGIPVAKMMQGEKD
KLLQMEGKLHERVVGQDEAIGAVANAIRRSRSGLSDPNRPTGSFLFLGPTGVGKTELCKALAGFLFDSEDHLVRIDMSEF
MEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVLLLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIVMT
SNIGSPIIQSMVGQPYEEIKDAVTDELKNYFRPEFLNRIDETVVFHALDAKNIESIARIQLKVLLARLAKMDLVLDVSEA
AIGELAKVGFDPVFGARPLKRAIQQRIENPLSKLLLEGRFPPKSTIHVDVDPILNPGVFRFGEAQPA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec27 YP_851418.1 ATPase Not tested PAI II APEC-O1 Protein 4e-102 41
aec27 AAQ96721.1 Aec27 Not tested AGI-1 Protein 3e-102 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pnap_2225 YP_982454.1 ATPase VFG2076 Protein 1e-108 44
Pnap_2225 YP_982454.1 ATPase VFG0079 Protein 1e-139 43