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Name : Pnap_2020 (Pnap_2020) Accession : YP_982250.1 Strain : Polaromonas naphthalenivorans CJ2 Genome accession: NC_008781 Putative virulence/resistance : Virulence Product : lysine decarboxylase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG1982 EC number : 4.1.1.18 Position : 2147972 - 2150305 bp Length : 2334 bp Strand : - Note : PFAM: Orn/Lys/Arg decarboxylase, major region; Orn/Lys/Arg decarboxylase domain protein; KEGG: pol:Bpro_2415 lysine decarboxylase DNA sequence : ATGCCCTCCGACAGGTTCTGGGCACCCTCAACTGCTGCATACGCCATGAAATTTCGCTTTCCGATTGTCATCATCGACGA GGACTTCCGTTCTGAAAACACCTCGGGACTGGGCATACGCGCACTCGCCCAGGCCATAGAAAGCGAAGGCTTCGAGGTGC TGGGCGTCACCAGCTACGGTGACTTGTCGCAGTTCGCGCAGCAGCAAAGCCGTGCCAGCGCCTTTATTTTGTCGATTGAC GATGAAGAGTTCACGCCCGGTCCCGATCTGGACCCGGCCGTGCTCGACCTGCGCAACTTCATTGCCGAGGTGCGCCGAAA AAACCTGGACGTGCCGATTTACGTTTATGGCGAGACCAAGACCTCGCGCCATATCCCGAACGACATCCTGCGCGAGCTGC ACGGCTTCATCCACATGTTCGAGGACACGCCCGAGTTCGTGGCGCGCCACATCATCCGCGAGGCCAAAAGCTACCTCGAA GGCGTGCAGCCGCCGTTTTTCAAGGCGCTGCTGGACTACGCCGAGGACGGCTCCTATTCATGGCATTGCCCCGGCCATTC CGGCGGCGTTGCTTTCCTGAAAAGCCCGGTCGGGCAGATGTACCACCAGTTCTACGGCGAGAACATGCTGCGCTCGGACG TCTGCAACGCGGTGGAAGAGCTGGGCCAACTGCTCGACCACAACGGCGCCATCGGCGCCAGCGAGCGCAATGCGGCGCGC ATCTTCAATGCCGACCATTGCTTTTTCGTGACCAACGGCACGTCAACGTCCAACAAGATGGTCTGGCACCATACCGTGGC GCCGGGCGACGTGGTGGTGGTGGACCGCAACTGCCATAAATCGATCCTGCACGCCATCATCATGACCGGCTCGATCCCGG TGTTCCTCAAGCCCACGCGCAACCATTTCGGCATCATCGGCCCGATTCCGCAAAGCGAATTCGAGCCCGAGGCGATTCGC GCCAAGATTGCCGCCAACCCCTTGCTCAAGGGCGTTGATGCCGCCACCGTCAAGCCACGCGTGCTGACGCTGACCCAATC GACCTACGACGGCGTGCTCTACAACACCGAGACCATCAAGGGCATGCTCGACGGCTACATCGACAACCTGCACTTTGACG AAGCCTGGCTGCCGCACGCCGCTTTCCACCCGTTCTACGGCACCTACCACTCGATGGGCAAGAACCGCATCCGGCCGAAA AACGCCGTGGTGTACGCCACGCAGTCGATCCACAAGCTGCTGGCCGGCATCAGCCAGGCCAGCCATGTCTTGGTGCAGGA TTCGCAGAACGTCAAGCTCGACAGGCACCTGTTCAACGAGGCCTACCTGATGCACACCTCGACCTCGCCGCAGTACAGCA TCATTGCCAGCTGCGACGTGGCCGCCGCCATGATGGAGCCGCCCGGCGGCACCGCGCTGGTCGAGGAAAGCATTGCCGAG GCGCTCGATTTCCGCCGCGCCATGCGCAAGATCGATGAGGAATATGGCGCGGACTGGTGGTTCAAGGTCTGGGGGCCGGA CAAGCTGGTGGAGGAAGGCATTGGCCGTGCCCAGGACTGGATCATCAAGGGCGAGTCGCGCAGCGCCAAGACCGCAAAGA ACGGCGCGGCCAACTGGCACGGCTTTGGCCAGATGGCCACCGGCTTCAACATGCTGGACCCGATCAAATCGACCATCGTC ACGCCGGGGCTGGACCTGAACGGCAAGTTTGCCAAGACCGGCATTCCGGCCAGCATCGTGACCAAGTTCCTGGCCGAGCA TGGCGTGATTGTGGAAAAGACCGGCCTGTACAGCTTTTTCATCCTGTTCACCATCGGCATCACCAAGGGCCGCTGGAACA CGCTGCTGACCGCGCTGCAGCAGTTCAAGGACGACTACGACAAGAACCAGCCGATGTGGCGCATCCTGCCCGAGTTCTGC CAGAAGTTCCCGAAGTACGAGCGCATGGGGCTGGCCGACCTGTGCCAGCATATTCATGCCCTGTATGCCAAGTACGACAT TGCACGGCTGACGACTGAGGTGTACCTGAGCGACCTGATGCCGGCCATGAAGCCGAGCGACGCCTACGCCCACATTGCCC ATCGCACGACCGAGCGGGTGGAAATCGACCATCTGGAAGGCCGGATCACCGTCGGGCTGGTGACACCTTACCCGCCGGGT ATTCCGCTCCTGATTCCCGGTGAAGTGTTTAACAAGAAAATCGTCGATTACCTGAAGTTTTCCCGCGAATTCAATGCGCA GTGCCCGGGTTTCGAGACTGACATTCATGGTCTGGTCGAGCAGGCCGATGCGAAGGGAAAAGTCCGCTACTACGCCGACT GCGTGAAGAAATAA Protein sequence : MPSDRFWAPSTAAYAMKFRFPIVIIDEDFRSENTSGLGIRALAQAIESEGFEVLGVTSYGDLSQFAQQQSRASAFILSID DEEFTPGPDLDPAVLDLRNFIAEVRRKNLDVPIYVYGETKTSRHIPNDILRELHGFIHMFEDTPEFVARHIIREAKSYLE GVQPPFFKALLDYAEDGSYSWHCPGHSGGVAFLKSPVGQMYHQFYGENMLRSDVCNAVEELGQLLDHNGAIGASERNAAR IFNADHCFFVTNGTSTSNKMVWHHTVAPGDVVVVDRNCHKSILHAIIMTGSIPVFLKPTRNHFGIIGPIPQSEFEPEAIR AKIAANPLLKGVDAATVKPRVLTLTQSTYDGVLYNTETIKGMLDGYIDNLHFDEAWLPHAAFHPFYGTYHSMGKNRIRPK NAVVYATQSIHKLLAGISQASHVLVQDSQNVKLDRHLFNEAYLMHTSTSPQYSIIASCDVAAAMMEPPGGTALVEESIAE ALDFRRAMRKIDEEYGADWWFKVWGPDKLVEEGIGRAQDWIIKGESRSAKTAKNGAANWHGFGQMATGFNMLDPIKSTIV TPGLDLNGKFAKTGIPASIVTKFLAEHGVIVEKTGLYSFFILFTIGITKGRWNTLLTALQQFKDDYDKNQPMWRILPEFC QKFPKYERMGLADLCQHIHALYAKYDIARLTTEVYLSDLMPAMKPSDAYAHIAHRTTERVEIDHLEGRITVGLVTPYPPG IPLLIPGEVFNKKIVDYLKFSREFNAQCPGFETDIHGLVEQADAKGKVRYYADCVKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66195.1 | putative cadaverin decarboxylase | Virulence | PAI III 536 | Protein | 2e-106 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Pnap_2020 | YP_982250.1 | lysine decarboxylase | VFG1670 | Protein | 1e-106 | 41 |
