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Name : Pnap_1942 (Pnap_1942) Accession : YP_982173.1 Strain : Polaromonas naphthalenivorans CJ2 Genome accession: NC_008781 Putative virulence/resistance : Unknown Product : RNA-binding S1 domain-containing protein Function : - COG functional category : K : Transcription COG ID : COG2183 EC number : - Position : 2063159 - 2065495 bp Length : 2337 bp Strand : + Note : PFAM: RNA binding S1 domain protein; SMART: Resolvase, RNase H domain protein fold; KEGG: pol:Bpro_2537 RNA binding S1 DNA sequence : ATGCAAAAAATCATTCGCCAGATCGCCACCGAAATCAGGGTTCATGAACACCAGATCAAGACCGCCGTGGAGCTGCTCGA TGGCGGGGCCACGGTGCCCTTCATTGCGCGCTACCGCAAGGAAGCCACCGGCGGGCTGGACGACATCCAGCTGCGCGAAC TCGAGCAGCGGCTGTCTTATCTGCGCGAACTGGAAAGCCGCCGCGAAACGGTGCTCAAGAGCATCGATGAGCAGGGCAAG CTGACGCCCGAATTGCGCGCGGCCATTGAATTCGCCGCCACCAAGCAGGATCTCGAAGACCTGTACCTGCCCTACAAGCC AAAACGCCGCACCAAGGGCCAGATCGCCCGCGAATCGGGCATCGAGCCGCTGGCTAACCGGCTGTTTGCCGACTCATCCT TGAACCCTGCTGAAGAAGCCGCTGCCTACGTGAAGGCCGAAAAGAACGAAAGCGGCGACGATTTCACCACCGTGCAGGCG GTGCTCGACGGCGTGCGCGACATCCTCAGCGAGCGCTGGGCCGAGGACGCGCCGCTGGTGCAGTCGCTGCGCCAGTGGCT CTGGAGCGAGGGCCTGCTGTCGTCCAAACTGGTCGCCGGCAAGGACGAGAACCATGCCGACAACGCCAAGTTCCGCGATT ATTTCGACTACGACGAGCCGATGGGCCGCGTGCCGTCGCACCGCGCGCTGGCCGTGTTCCGGGGCCGGGGGCTGGAAATC CTGGACGCCAAGCTGGTGCTGCCCGAGCCGCCCGAGGCCGGCAAGCCCAGCATCGCCGAGGGCAAGATTGCGCTGCACTT GGGCTGGAGCCACAAGGCGCGGCCGGCCGACGATTTGATCCGCAAGTGCATCGCCTGGACCTGGCGCGTCAAGCTCAGCC TGTCGCTGGAGCGCGACCTGTTCACCCGCTTGCGTGAGGACGCCGAAAAAGTCGCCATCAAGGTGTTTGCCGACAACCTG CGCGACCTGCTGCTGGCCGCGCCGGCCGGCCCGCGCGTGGTGATGGGGCTGGACCCCGGCATTCGCACCGGCGTGAAGGT GGCCGTGGTCGATACGACGGGCAAGCTGGTCGAAACCGCTACGGTGTTTCCGCACGAGCCGCGCAAGGACTGGGACGGCT CGCTGCACACGCTCGCCAAGCTGTGCGAAAAGCACGGCGTGAACCTGATCGCGATTGGCAACGGCACGGCCAGCCGCGAA ACCGACAAGCTGGCCGCCGACCTGATGAAGCGTATCGACGGCATGCAGCGCGTGGTGGTCAGCGAAGCCGGTGCCTCGGT CTATTCGGCCAGCGAATTCGCCAGCCAGGAAATGCCCGATGTCGATGTGAGCCTGCGCGGCGCCGCCAGCATCGCGCGCC GCCTGCAGGATCCGCTGGCCGAGCTGGTCAAGATCGACCCGAAATCGATTGGCGTCGGCCAGTACCAGCACGACGTGAAC CAGAGCGACCTGGCGCGCAGCCTGAGCGCGGTGGTCGAGGACTGCGTGAACAGCGTCGGCGTGGACCTGAACACCGCCAG CGTGCCGCTGCTGGCGCGCGTGTCGGGGCTGAGCCAGACGGTGGCCAAGTCGGTGGTGCGCTGGCGCGATGCGAACGGCG CGTTCGGCAGCCGCGCTGATTTGCTCAAGGTCACGGGGCTGGGCGCCAAGACCTTCGAGCAAAGCGCGGGCTTTTTGCGC CTGCGCGGGGGCACCAATCCGCTGGACATGACCGGCGTGCATCCCGAGACCTATGCGGTCGTTGAAAAGATCATGGCGCA CACCGGCCGGCCGGTGGCCGAGCTGATGGGCCGCGCCGAGATGCTCAAGACGCTCAAGCCCGAGCTGTTCGCCAACGAGA AGTTCGGCGTCATCACGGTCAAAGACATCCTGGCCGAGCTGGAAAAGCCGGCCCGCGACCCGCGCCCCGACTTCAAGGTG GCGCGCTTCAATGACGGCGTGGAAGACATCCGCGACTTGAAGGAAGGCATGCTGCTCGAAGGCACGGTCAGCAACGTGGC GGCCTTCGGCGCGTTCATCGACATTGGCGTGCACCAGGACGGCCTGGTGCATGTCAGCCAGCTGTCCAACAAGTTCGTGA CCGACGCGCGCGAGGTTGTGAAAACCGGCGACATCGTCAAGGTGCGCGTGACCGAGGTCGATGTGGCCCGCAAGCGCATC GGCCTGACCATGAAGCTGGACGCTGCGCCAGCGCGCCGTGACGCCCCGCGCGACAACCGCTTTGAAGGCGCCCGGCCCGG CACGCAAAACCGTGGCGGAGCGCGGCAGGGCGCGCCGCAGCCGGCATCAACTGCGATGGAATCGGCGTTCAGCAAGCTGG CGGGACTGAAGAAATAG Protein sequence : MQKIIRQIATEIRVHEHQIKTAVELLDGGATVPFIARYRKEATGGLDDIQLRELEQRLSYLRELESRRETVLKSIDEQGK LTPELRAAIEFAATKQDLEDLYLPYKPKRRTKGQIARESGIEPLANRLFADSSLNPAEEAAAYVKAEKNESGDDFTTVQA VLDGVRDILSERWAEDAPLVQSLRQWLWSEGLLSSKLVAGKDENHADNAKFRDYFDYDEPMGRVPSHRALAVFRGRGLEI LDAKLVLPEPPEAGKPSIAEGKIALHLGWSHKARPADDLIRKCIAWTWRVKLSLSLERDLFTRLREDAEKVAIKVFADNL RDLLLAAPAGPRVVMGLDPGIRTGVKVAVVDTTGKLVETATVFPHEPRKDWDGSLHTLAKLCEKHGVNLIAIGNGTASRE TDKLAADLMKRIDGMQRVVVSEAGASVYSASEFASQEMPDVDVSLRGAASIARRLQDPLAELVKIDPKSIGVGQYQHDVN QSDLARSLSAVVEDCVNSVGVDLNTASVPLLARVSGLSQTVAKSVVRWRDANGAFGSRADLLKVTGLGAKTFEQSAGFLR LRGGTNPLDMTGVHPETYAVVEKIMAHTGRPVAELMGRAEMLKTLKPELFANEKFGVITVKDILAELEKPARDPRPDFKV ARFNDGVEDIRDLKEGMLLEGTVSNVAAFGAFIDIGVHQDGLVHVSQLSNKFVTDAREVVKTGDIVKVRVTEVDVARKRI GLTMKLDAAPARRDAPRDNRFEGARPGTQNRGGARQGAPQPASTAMESAFSKLAGLKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| NMB0075 | NP_273139.1 | transcriptional accessory protein Tex | Not tested | IHT-A | Protein | 0.0 | 57 |
