|
Name : Pnap_0019 (Pnap_0019) Accession : YP_980266.1 Strain : Polaromonas naphthalenivorans CJ2 Genome accession: NC_008781 Putative virulence/resistance : Unknown Product : thiamine biosynthesis protein ThiC Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0422 EC number : - Position : 16663 - 18579 bp Length : 1917 bp Strand : + Note : required for the synthesis of the hydromethylpyrimidine moiety of thiamine DNA sequence : ATGGCCAAAACCAATCTTTCCGTCGATGCAGCGGACCTGACCAGCCGCATCACCCGCACGCCTTTTCCGGGTTCGCGCAA GATCTACATCGAAGGCTCGCGCCCCGACATCCGCGTGCCGTTTCGCGAAGTCACGCTCACCGACACGCTGGTGGCCGAAG GCAGTGAAACCCGCCGCGAGGCCAATCCGCCGCTGCGCCTGTTCGACTCGTCGGGCGTGTACACCGACCCGGCAGCAAGC ATCGACATCACGCGCGGCCTGTCTCCGCTGCGCGGCGCCTGGATCAACGAGCGCCAGGACACCGAAGCCCTGCCCGGCAT CAGCAGCGCCTACGGCCGCGAGCGCCTGAACGACCCGGCCCTCAGCGCGCTGCGCATGGCCCACGCGCCCGTGCCGCGCC GCGCCAAGGCGGGCGCCAACGTGTCGCAGATGCATTACGCGCGCCAGGGCATCATCACGCCGGAGATGGAATACATCGCG ATCCGCGAAAACCTGGTGCGCGCCCAGCTTGCCGAACGCCTGGCGACCGAGCGCGTGCCGAAAACCGGCCATTCGTTCGG CGCGTCGATTCCGAAAGACATCACCGCCGAATTCGTTCGCGACGAAGTGGCGCGCGGCCGCGCCGTGATTCCGAACAACA TCAACCACCCCGAAACCGAGCCGATGATCATCGGCCGCAACTTCCTGATCAAGGTCAACGCCAACATCGGCAACTCGGCC GTCACCTCGTCGATTGAAGAGGAGGTGGACAAGCTGGCCTGGTCGATCCGCTGGGGGGCCGACACCGTGATGGACCTCTC GACCGGCGAGAACATCCACGAAACCCGCGAATGGATTCTGCGCAATTCGCCGGTGCCGATTGGCACGGTGCCGATTTACC AGGCGCTGGAAAAAGTCAACGGCAAGGCCGAAGACCTGACCTGGGAAATCTTCCGCGACACGTTGATCGAGCAGGCCGAG CAGGGCGTGGACTATTTCACCATCCACGCCGGCGTGCGCCTGGCCTATGTGCCGCTGACCGCGAACCGCCTGACCGGCAT CGTCTCGCGCGGCGGCTCGATCATGGCGAAATGGTGTTTGTCGCACCACAAGGAAAGCTTTTTGTACGAGCATTTCGAGG AGATTTGCGAAATCATGAAGGCCTACGACGTCTGCTTCTCGCTCGGCGACGGCCTGCGCCCCGGCTCGATTGCCGACGCC AATGACGAAGCGCAGTTCGCCGAACTGCACACGCTGGGCGAACTCACGCAGATCGCCTGGAAGCACGACGTTCAGGTGAT GATCGAAGGCCCCGGCCATGTGCCGCTGCAGCTGGTCAAGGAAAACGTCGAGAAGCAACTCGAAGCCTGCTTTGAAGCGC CGTTCTACACGCTTGGCCCCTTGATCACCGACATCTCGCCCGGCTACGACCATATTTCGTCGGCGATGGGCGCGGCGAAT ATCGGCTGGTACGGCACGGCCATGCTGTGCTACGTGACGCCCAAGGAGCATCTGGGCCTGCCGAACCGCGACGACGTGAA GCAGGGCCTGATCGCCTACAAGATCGCCGCGCATGCGGGCGACCTGGCCAAGGGCTACCCGGGCGCGCAGATGTGGGACA ACGCGGTCAGCAAGGCGCGCTTCGAGTTCCGCTGGGAAGACCAGTTCCGCCTGGCGATTGACCCCGACACGGCGATGGCC TACCACGATGAAACGCTGCCCAAGGAAAACGCCAAGGTGGCGCATTTCTGCTCGATGTGCGGGCCGAAGTTCTGCTCGAT GAAGATTTCGCAGGAAGTGCGCGAGTTTGCGCGGCTGAATCCGTCCACCACGACGCTGGCCAAGGCGCCGGGCGTGATTC CGATCCAGCAGGTCAGCAGCGGCTTCGAGGAAAAAGCCGAGGAGTTCCGCAAGGGCGGGAACGAGATTTACTCCTGA Protein sequence : MAKTNLSVDAADLTSRITRTPFPGSRKIYIEGSRPDIRVPFREVTLTDTLVAEGSETRREANPPLRLFDSSGVYTDPAAS IDITRGLSPLRGAWINERQDTEALPGISSAYGRERLNDPALSALRMAHAPVPRRAKAGANVSQMHYARQGIITPEMEYIA IRENLVRAQLAERLATERVPKTGHSFGASIPKDITAEFVRDEVARGRAVIPNNINHPETEPMIIGRNFLIKVNANIGNSA VTSSIEEEVDKLAWSIRWGADTVMDLSTGENIHETREWILRNSPVPIGTVPIYQALEKVNGKAEDLTWEIFRDTLIEQAE QGVDYFTIHAGVRLAYVPLTANRLTGIVSRGGSIMAKWCLSHHKESFLYEHFEEICEIMKAYDVCFSLGDGLRPGSIADA NDEAQFAELHTLGELTQIAWKHDVQVMIEGPGHVPLQLVKENVEKQLEACFEAPFYTLGPLITDISPGYDHISSAMGAAN IGWYGTAMLCYVTPKEHLGLPNRDDVKQGLIAYKIAAHAGDLAKGYPGAQMWDNAVSKARFEFRWEDQFRLAIDPDTAMA YHDETLPKENAKVAHFCSMCGPKFCSMKISQEVREFARLNPSTTTLAKAPGVIPIQQVSSGFEEKAEEFRKGGNEIYS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| thiC | YP_001598318.1 | thiamine biosynthesis protein ThiC | Not tested | MDA | Protein | 0.0 | 69 |
| BJAB07104_00317 | YP_008207782.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR25 | Protein | 0.0 | 68 |
| BJAB0868_00321 | YP_008211647.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR26 | Protein | 0.0 | 68 |
