Gene Information

Name : Pnap_1535 (Pnap_1535)
Accession : YP_981770.1
Strain : Polaromonas naphthalenivorans CJ2
Genome accession: NC_008781
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1624108 - 1624776 bp
Length : 669 bp
Strand : +
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rfr:Rfer_0503 two component transcriptional regulator, winged helix family

DNA sequence : 
ATGCGCATCCTGCTTGCCGAAGACGATTCCTTGCTGGGCGACGGCCTGCGCGCCGGGCTGCGCCAGCTCGGCTTTCAGGT
GGACTGGGTGCGCGATGGCGAAGCCGCCGAGCGCGAGCTGCGCGCCCAGCCGTATGAAGCCGCTGTGCTCGACCTCGGGC
TGCCGCGCAAGGATGGCCTGGACGTTCTGGCCGCCGTTCGCCGCTCTGGCGTCAAGACGCCGGTGCTGGTGCTGACCGCC
CGCGACGCCGTGCCCGAGCGCATACGCGGACTCGATGCCGGCGCCGACGACTATGTCGTCAAGCCGGTCGATCTGCACGA
GCTGGCCGCGCGGCTGCGCGCGCTGGTGCGCCGCGCGCACGGCCAGCCGCAGGAGCGCCTGAGCGCGCAGGATGTCGAGC
TGGACCCGGCGTCCCGCACGGTGCGCAAGGCGGGCGAGCCGGTCACGCTTTCGACGCGGGAGTTCGATCTGCTGCAGGCC
TTCATGCTCAGCGCCGACCGCGTGCTGTCGCGCGAGCAGCTGGAGCAGCAGCTCTACAGCTGGGGCCAGGAGGTGGAGAG
CAACGCCATCGAGGTGCATATCCACAATTTGCGGCGCAAGCTCGGTCCGGCGCTGATCCACACGGTGCGCGGCGTCGGCT
ACATGCTGCAGAAGGGCCTGTCCAGATGA

Protein sequence : 
MRILLAEDDSLLGDGLRAGLRQLGFQVDWVRDGEAAERELRAQPYEAAVLDLGLPRKDGLDVLAAVRRSGVKTPVLVLTA
RDAVPERIRGLDAGADDYVVKPVDLHELAARLRALVRRAHGQPQERLSAQDVELDPASRTVRKAGEPVTLSTREFDLLQA
FMLSADRVLSREQLEQQLYSWGQEVESNAIEVHIHNLRRKLGPALIHTVRGVGYMLQKGLSR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 2e-36 51

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pnap_1535 YP_981770.1 two component transcriptional regulator BAC0487 Protein 5e-33 43
Pnap_1535 YP_981770.1 two component transcriptional regulator BAC0197 Protein 1e-31 42
Pnap_1535 YP_981770.1 two component transcriptional regulator BAC0083 Protein 2e-27 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pnap_1535 YP_981770.1 two component transcriptional regulator VFG0473 Protein 4e-38 46
Pnap_1535 YP_981770.1 two component transcriptional regulator VFG1390 Protein 1e-27 41
Pnap_1535 YP_981770.1 two component transcriptional regulator VFG1389 Protein 2e-24 41