Gene Information

Name : Pnap_1154 (Pnap_1154)
Accession : YP_981391.1
Strain : Polaromonas naphthalenivorans CJ2
Genome accession: NC_008781
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1225252 - 1225899 bp
Length : 648 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pol:Bpro_3214 ABC transporter related

DNA sequence :
ATGAGCCTGAACATCAGCCAGCTCGGCAAGCGCTACGGCGACACCATCGTCTTCAGCCAGGTCAGCCTTAGCGTGGCGCC
CGGCGAATTCGTCGCCATCGTCGGCGAGTCGGGCGTCGGCAAATCGACGCTGCTCAACTGCATGGCCGGGCTCGACAGCT
GGGACGAAGGCACGGTACTGCTCAACGGCGCCGACCTGGGCGCGATGAGCGACGACCAGCGCGCGCTGCTGCGCCGCCGC
CATGTCGGCTTTGTGTTCCAGGCCTTTCATGTGCTGCCGCACCTAGACGTGGCGCAAAACGTCGCGCTGCCGCTGTTGCT
GCTGGGCCAGCCCGACGACGCGCGCGTTCAAACGTTGCTGGAAGCGGTCGGCCTGGGCGGACTGGGGTCGCGCCTGCCGC
AGCAGCTGAGCGGCGGGCAGCTGCAGCGCGTGGCGATTGCGCGGGCGCTGGTGCATCGGCCCGGCCTGCTGCTGGCCGAC
GAGCCAACCGGCAACCTCGACCCGGCCACCGCCGCCAGGGTGATGGACGCGCTGATCGCCCAGACCCGCGAGCACGGCGC
GGCGATGGTGCTGGTCACGCATTCAGTCGCCGCCGCGGCGCGCGCCGACCGGGTGCTGCATTTGAGCGCCGACGGCATCA
CCGACTGA

Protein sequence :
MSLNISQLGKRYGDTIVFSQVSLSVAPGEFVAIVGESGVGKSTLLNCMAGLDSWDEGTVLLNGADLGAMSDDQRALLRRR
HVGFVFQAFHVLPHLDVAQNVALPLLLLGQPDDARVQTLLEAVGLGGLGSRLPQQLSGGQLQRVAIARALVHRPGLLLAD
EPTGNLDPATAARVMDALIAQTREHGAAMVLVTHSVAAAARADRVLHLSADGITD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-34 47
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-34 47
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 9e-34 47
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-34 47
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 4e-30 42
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 3e-20 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pnap_1154 YP_981391.1 ABC transporter-like protein NC_008702.1.4606598. Protein 3e-31 48
Pnap_1154 YP_981391.1 ABC transporter-like protein CP001581.1.gene798.p Protein 2e-41 45
Pnap_1154 YP_981391.1 ABC transporter-like protein NC_012469.1.7686878. Protein 1e-34 44
Pnap_1154 YP_981391.1 ABC transporter-like protein NC_012469.1.7685735. Protein 4e-32 41