Gene Information

Name : trbB (CJJ81176_pVir0005)
Accession : YP_980064.1
Strain :
Genome accession: NC_008770
Putative virulence/resistance : Virulence
Product : conjugative transfer regulon protein
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG4962
EC number : -
Position : 3085 - 4038 bp
Length : 954 bp
Strand : +
Note : identified by match to protein family HMM PF00437

DNA sequence : 
ATGAGTAATAATACTATTGTTTTAAATAATATTTTAAATGTTTTAAAACCTTACTTAGAAATGGAAGCAAACGAGCTTAT
TTTTAATAAACCTTGTGAAATCAAGGTAGATAAAGGCGATGTTTGGGAAACTATTTATGATGATAGGCTCAATTATAATT
TTTTAGAAACCTTTTTAATTGAACTTGCTATTAAAAGAAATCAGAGATTTGATGAAAAACATTGTCATCTCTCTTGTGAG
TTGCCTTACCCCTTTTTAAGATATAGGGTGCAAGCACAGCACAAGACAAGTCTTTTTAATTCTGAAATTTGTATTTGTAT
CAGAATACCTTCAAAAAGTCGTTTTGCACTTGAAAATTTTGTTTTAAACGATAAGTGTTTAGAAAAAGGTTGGACTTATG
AAAAAATTAAAGATTTAATTAAAAATAAAAAGAATGTTTTAGTCTCAGGTGGAACAGGAAGTGGAAAAACTAGCTTTTTA
AATTCTTTAATGGGTGAAATTGATCCAAATGAAAGAATTGTAACTATTGAAGACGCTCAAGAATTATATATCGAAAACGA
GAACAAAACCCAATTAGCCGTGCCAAAAGAAGAAAGTGAAATCTATTCCTATCAAACGGCGATAAATAACGCTATGAGAT
TAAGACCTGATAGATTATTTTTAGGAGAAATTGATATCAGAAACACCTTTACATTTTTAAGGGTAAATAACACAGGACAC
GCAGGAAACTTAAGCACTCTGCACGCAAATAATCCAGAAGACGCGATCAAAGCTATTATCACAAATATTATTTTAGGTGG
GGGCTTACAAAACCCTGATAATAAAATGCTTACTGAACTAATTATAACGGCTATAGATTTTATTATACAAATTTCGAGAA
ATAAAAAAACAGGGACTAGAGATATTACAGATATTTTAGATTTGAAAAATGATTACGCAAAATTATTAATCTAA

Protein sequence : 
MSNNTIVLNNILNVLKPYLEMEANELIFNKPCEIKVDKGDVWETIYDDRLNYNFLETFLIELAIKRNQRFDEKHCHLSCE
LPYPFLRYRVQAQHKTSLFNSEICICIRIPSKSRFALENFVLNDKCLEKGWTYEKIKDLIKNKKNVLVSGGTGSGKTSFL
NSLMGEIDPNERIVTIEDAQELYIENENKTQLAVPKEESEIYSYQTAINNAMRLRPDRLFLGEIDIRNTFTFLRVNNTGH
AGNLSTLHANNPEDAIKAIITNIILGGGLQNPDNKMLTELIITAIDFIIQISRNKKTGTRDITDILDLKNDYAKLLI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
virB11-1 YP_002301094.1 VirB11 type IV secretion ATPase Virulence cag PAI Protein 7e-46 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
trbB YP_980064.1 conjugative transfer regulon protein VFG1979 Protein 5e-140 100