Gene Information

Name : ctrC (NMC0057)
Accession : YP_974199.1
Strain : Neisseria meningitidis FAM18
Genome accession: NC_008767
Putative virulence/resistance : Virulence
Product : capsule polysaccharide export inner-membrane protein
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG1682
EC number : -
Position : 69555 - 70352 bp
Length : 798 bp
Strand : +
Note : -

DNA sequence : 
ATGAAAGCCTTGCATAAAACATCATTTTGGGAATCTTTAGCCATTCAAAGGCGCGTAATCGGTGCGCTTTTGATGCGGGA
AATTATCACCCGTTACGGTCGCAATAATATTGGCTTTTTATGGCTGTTTGTTGAGCCGTTGCTGATGACATTCGTTATCG
TCTTGATGTGGAAATTTTTAAAGGCAGACCGATATTCAACTTTGAATATTGTCGCATTTGCGATTACTGGCTATCCGATG
TTGATGATGTGGCGTAATGCCTCAAAACGGGCAGTTGGGTCGATTTCTTCAAATGCCAGCTTGCTTTATCACCGCAATGT
AAGAGTTTTGGATACCATCTTGGCGCGCATGATTTTGGAAATTGCTGGTGCAACCATTGCGCAGATTGTGATTATGGCGG
TATTGATTGCGATTGGCTGGATTGAAATGCCGGCAGATATGTTTTATATGCTGATGGCTTGGCTTTTGATGGCTTTTTTT
GCGATTGGTTTGGGTTTGGTGATTTGTTCGATTGCCTTTAATTTCGAGCCGTTTGGCAAGATTTGGGGCACATTGACTTT
TGTGATGATGCCGTTATCGGGTGCATTCTTTTTTGTACATAATTTGCCTCCGAAAGTGCAAGAGTATGCATTGATGATCC
CGATGGTGCATGGCACAGAAATGTTCCGTGCCGGATATTTTGGCAGCGATGTAATTACCTATGAAAATCCTTGGTATATC
GTATTGTGCAATCTGGTGTTGTTGTTGTTTGGCTTGGCGATGGTCAGTAAATTCAGTAAAGGAGTCGAGCCGCAATGA

Protein sequence : 
MKALHKTSFWESLAIQRRVIGALLMREIITRYGRNNIGFLWLFVEPLLMTFVIVLMWKFLKADRYSTLNIVAFAITGYPM
LMMWRNASKRAVGSISSNASLLYHRNVRVLDTILARMILEIAGATIAQIVIMAVLIAIGWIEMPADMFYMLMAWLLMAFF
AIGLGLVICSIAFNFEPFGKIWGTLTFVMMPLSGAFFFVHNLPPKVQEYALMIPMVHGTEMFRAGYFGSDVITYENPWYI
VLCNLVLLLFGLAMVSKFSKGVEPQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ctrC NP_273137.1 capsule polysaccharide export inner-membrane protein Not tested IHT-A Protein 9e-115 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ctrC YP_974199.1 capsule polysaccharide export inner-membrane protein VFG0257 Protein 4e-115 99
ctrC YP_974199.1 capsule polysaccharide export inner-membrane protein VFG0697 Protein 1e-84 70
ctrC YP_974199.1 capsule polysaccharide export inner-membrane protein VFG0685 Protein 1e-84 70
ctrC YP_974199.1 capsule polysaccharide export inner-membrane protein VFG2564 Protein 7e-45 45