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Name : ctrB (NMC0056) Accession : YP_974198.1 Strain : Neisseria meningitidis FAM18 Genome accession: NC_008767 Putative virulence/resistance : Virulence Product : capsule polysaccharide export inner-membrane protein Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG3524 EC number : - Position : 68392 - 69555 bp Length : 1164 bp Strand : + Note : - DNA sequence : ATGTCTGAGCAACTTCCTGTGGCAGTTGCCACTGAAACCAAAGCCGAGCGTAAAAAGCCGAAAAAGAAAAGTTGGATTAA AAAGCTAAGCCCTTTATTTTGGGTAACGGTGATTATCCCTACGGTAATTTCGTTGGTGTATTTCGGCTTCTTCGCTTCCG ATCGTTTTACGTCGCAATCGAGCTTTGTGGTGCGCTCGCCTAAAAGCCAATCTTCTCTCAATGGCCTGGGTGCCATTTTG CAGGGCACAGGTTTTGCCCGTGCGCAAGATGATATTTACACGGTTGGGGAGTATATGCGTTCGCGCTCGTCTTTGGATGA ACTGCGTAAAATCTTGCCGGTGCGTGAGTTTTATGAAACCAAAGGTGATGCGTTCAGCCGCTTTAATGGGTTTGGGTTCC GTGGCGAGGAAGAGGCTTTTTATCAATACTATAAAAATCAGGTGATGATCAATTTTGATACGGTTTCGGGTATTTCCACG TTGAATGTAACTTCCTTTGATGCGCTGGAATCTAAGAAAATCAATGAGGCTTTGTTAAAACAAGGTGAAGCATTGATTAA CCAGTTGAACGATCGTGCACGTGCTGATACGGTGCGCTATGCGGAAGAAGTAGTGAAAACGGCGGCAGAGCGGGTAAAGG AAGCCTCTCAGAATCTGACGGATTACCGGATTGCCAATGGCGTTTTTGATTTGAAAGCGCAATCGGAAGTGCAAATGGGG TTGGTTTCCAAGCTGCAAGATGAATTGATTGTGATTCAAACCCAGCTGGATCAGGTGAAAGCAGTCACTCCGGAGAATCC GCAGATTCCGGGTTTGCAGGCGCGTGAGCAGAGCTTGCGTAAAGAAATTGACCAACAGTTACGTGCCATTTCGGGCGGTG GGCATTCTTCGTTGTCTAATCAGGCTGCCGAATATCAGCGTGTGTATTTGGAAAACCAGTTGGCAGAGCAGCAGTTGGCA GCCGCCATGACTTCTTTGGAAAGTGCCAAGGTTGAAGCAGACCGTCAGCAGCTTTATTTGGAAGTGATCTCGCAACCGAG CCTGCCGGATTTGGCACATGAGCCTAAACGGTTATACAACATTGTTGCCACTCTGATTATCGGCTTGATGGTTTATGGTA TTTTGAGCCTGTTGACTGCCAGCATTCGTGAGCATAAAAACTGA Protein sequence : MSEQLPVAVATETKAERKKPKKKSWIKKLSPLFWVTVIIPTVISLVYFGFFASDRFTSQSSFVVRSPKSQSSLNGLGAIL QGTGFARAQDDIYTVGEYMRSRSSLDELRKILPVREFYETKGDAFSRFNGFGFRGEEEAFYQYYKNQVMINFDTVSGIST LNVTSFDALESKKINEALLKQGEALINQLNDRARADTVRYAEEVVKTAAERVKEASQNLTDYRIANGVFDLKAQSEVQMG LVSKLQDELIVIQTQLDQVKAVTPENPQIPGLQAREQSLRKEIDQQLRAISGGGHSSLSNQAAEYQRVYLENQLAEQQLA AAMTSLESAKVEADRQQLYLEVISQPSLPDLAHEPKRLYNIVATLIIGLMVYGILSLLTASIREHKN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ctrB | NP_273136.1 | capsule polysaccharide export inner-membrane protein | Not tested | IHT-A | Protein | 5e-158 | 100 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ctrB | YP_974198.1 | capsule polysaccharide export inner-membrane protein | VFG0256 | Protein | 2e-158 | 100 |
| ctrB | YP_974198.1 | capsule polysaccharide export inner-membrane protein | VFG0686 | Protein | 5e-101 | 62 |
| ctrB | YP_974198.1 | capsule polysaccharide export inner-membrane protein | VFG0698 | Protein | 5e-101 | 62 |
| ctrB | YP_974198.1 | capsule polysaccharide export inner-membrane protein | VFG2565 | Protein | 1e-63 | 43 |
