|
Name : serS (NMC1602) Accession : YP_975570.1 Strain : Neisseria meningitidis FAM18 Genome accession: NC_008767 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 1635786 - 1637081 bp Length : 1296 bp Strand : + Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGTTAGACATCCAATTGCTCCGCAGCAACACCGCCGCCGTTGCCGAACGGCTTGCACGGCGCGGTTATGACTTTGATAC CGCACGTTTTGACGCACTGGAAGAACGACGCAAGTCCGTTCAGGTGAAAACCGAAGAATTACAAGCCTCGCGTAACAGCA TTTCCAAGCAAATCGGCGCACTGAAAGGTCAGGGCAAACACGAAGAGGCACAGGCGGCCATGGATCAAGTCGCCCAAATC AAAACCGATTTGGAACAGGCAGCCGCCGATTTGGAAGCCGTGCAAAAGGAACTGGACGCATGGCTGTTGAGCATTCCGAA CCTGCCGCATGAGGACGTGCCTTTCGGTAAGGATGAAACCGAAAACGTCGAAGTCCGCAAAGTCGGCACCCCGCGCGAAT TTGACTTTGAAATCAAAGACCATGTCGATTTGGGCGAACCTTTGGGTTTGGATTTCGAAGGTGGCGCGAAACTTTCCGGC GCACGATTTACCGTGATGCGCGGACAAATCGCCCGTCTGCACCGCGCCTTGGCACAGTTCATGCTGGATACGCACACGCT GCAACACGGCTACACCGAGCATTACACGCCTTATATCGTTGACGATACGACGCTGCAAGGTACGGGCCAACTACCAAAAT TTGCGGAAGATCTGTTCCACGTTACCCGTGGCGGCGACGAAACCAAAACCACCCAATACCTGATTCCGACAGCCGAAGTT ACCCTGACCAATACCGTTGCCGACAGCATTATCCCGTCCGAACAACTGCCGCTGAAGCTGACCGCGCATTCGCCCTGTTT CCGCAGCGAGGCGGGTTCGTACGGCAAAGACACGCGCGGTCTGATTCGCCAGCACCAGTTCGACAAAGTAGAAATGGTAC AAATCGTTCATCCCGAAAAATCATACGAAGCACTGGAAGAAATGGTCGGCCATGCCGAAAACATCCTGAAGGCTTTGGAA CTGCCCTACCGCGTGATTACCCTGTGTACCGGCGACATGGGCTTCGGCGCAACCAAAACGTATGACTTGGAAGTTTGGGT TCCCGCGCAAAATACCTACCGCGAAATCTCAAGCTGCTCCAACTGCGAAGATTTCCAAGCCCGCCGCATGAAGGCGCGTT TCAAAGACGAAAACGGCAAAAACCGCTTGGTACATACTTTGAACGGCTCCGGCTTGGCTGTCGGCAGAACGCTGGTCGCC GTATTGGAAAACCATCAAAACGCCGACGGCAGCATCAACATCCCTGCCGCACTGCAACCGTATATGGGCGGCGTTGCCAA GTTGGAAGTGAAATAA Protein sequence : MLDIQLLRSNTAAVAERLARRGYDFDTARFDALEERRKSVQVKTEELQASRNSISKQIGALKGQGKHEEAQAAMDQVAQI KTDLEQAAADLEAVQKELDAWLLSIPNLPHEDVPFGKDETENVEVRKVGTPREFDFEIKDHVDLGEPLGLDFEGGAKLSG ARFTVMRGQIARLHRALAQFMLDTHTLQHGYTEHYTPYIVDDTTLQGTGQLPKFAEDLFHVTRGGDETKTTQYLIPTAEV TLTNTVADSIIPSEQLPLKLTAHSPCFRSEAGSYGKDTRGLIRQHQFDKVEMVQIVHPEKSYEALEEMVGHAENILKALE LPYRVITLCTGDMGFGATKTYDLEVWVPAQNTYREISSCSNCEDFQARRMKARFKDENGKNRLVHTLNGSGLAVGRTLVA VLENHQNADGSINIPAALQPYMGGVAKLEVK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 2e-101 | 55 |
