|
Name : Ajs_4319 (Ajs_4319) Accession : YP_974145.1 Strain : Genome accession: NC_008766 Putative virulence/resistance : Unknown Product : DNA topoisomerase III Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0550 EC number : 5.99.1.2 Position : 61129 - 63192 bp Length : 2064 bp Strand : + Note : KEGG: bam:Bamb_6614 DNA topoisomerase III; TIGRFAM: DNA topoisomerase III; PFAM: TOPRIM domain protein; DNA topoisomerase, type IA, central domain protein; DNA topoisomerase, type IA, zn finger domain protein; SMART: DNA topoisomerase I, ATP-binding; DNA DNA sequence : ATGCGACTGTTCATCGCGGAAAAACCATCTGTCGCCAAGGCCATCGCCGGCGAGCTGGGCGTCACCGGCAAGGGCGACGG CTACATCGAATGCGGCGGCGACAAAGTGACCTGGTGCTTCGGGCACATGCTGGAGCAGGCCGACCCGGACGAGTACACGC CCGACGACGTGCCGACCGGGAAATCGGGCAAGAAGCTATGGCGCGTCGATGAGCTGCCCATCATCCCGCAGACCTGGATT CTTCACCCGAAGGACGATGCCAAGAAGCAGCTCGCCGTGATCGGCAAGCTGCTGAAAGAGGCCAAGGAGATCGTCAACGC CGGCGACCCCGACCGTGAAGGCCAGTTGCTGGTCGATGAGGTGCTGGAGCACTTCAAGAGCAGCAAGCCGACGCGCCGCT TTTGGGTGTCCGCCCAGGATTCGGTTTCCGTCAAGCGCGGCCTGGCCGCCTTGAAGGACAACACCACGTACAAGGGCTGG GCCGACGCCGCACGCGGCCGGCAGCGGGCCGACTGGCTGATCGGCATGAACCTAAGCCGCGCCTACACCTTGCGGGCGCA GCGCGGCGGTTCCAGGGCCTTGCTGACCGTGGGCCGGGTGCAGACCCCGACGCTGGCCCTGGTCGTGAATCGTGACCGTG AAATCGAGGCTTTCAAGCCGGTGCCGTATCACACGATCCGCGCAGCGATTCAGCACGAAGGCGGCACGTTTATGGCCGCC TGGAAGGCGAAGGAAGATCAAGCCGGCCTGGACAGCGAAGGCCGCCTTGTCGATACCGCCGTCGCCGATGCCCTGGTGGC CGCCGTCAAGGGCCAACCGGGCACCATCGCCACCTACAAGCAGGAAGCCAAGAAGAAGAACCAGCCGCTGGCCTTCGCGC TGTCGGACATTACGGCGCTGGCGTCCGCGCGGTACGGCTACAGCGCCGAGGACGTGCTGAACACCTGCCAGGCGCTCTAC GAGACGCACAAGCTGACCAGCTACCCGCGCACCGACTGCGCCTACCTGCCGGAGTCGCAGCACGCCGACGCGCCGCGCGT CCTGGAGGCCGTCAAGCACGTGAACCCCGAGCTGGCCGGCCTGGTCGATGGTGCCGACCCGCGCATCAAGTCCAAGACGT GGGACGACTCGAAGATCACGGCGCACCACGGCATCGTGCCGACCATGCAGAAGGGCAGCAAGGCCGGCTTGAGCGAACGC GAGCGCAACATCTACGAACTGATCGTCCGCGCCTACCTGGCGCAGTTCTATCCGCTGCACGAGTACATGCAAACCACGGT CGGCGTGGAGATCGCCGGCGAAAACTTCGCCGCGTCCGGCAAGGTGGTCACGCGCAACGGCTGGCGTGACGTGTTCGACC AGGCCGACGAAGAGGACGCCAAGGAAGGCGACGACGAAAACGGCGCGCAGACCCTGCCGGTGATGAAGCAAGGCGACGGT GTGACCTGCACCGAGGCCACCCGGCGCGATGCGAAAACCAAGCCGCCGGCGCGCTTCACCGAAGGCACGCTGATTCGCGC GATGGAGAACATCCACAAGTTCGTGAGCGACCCGGAGCACAAGAAGATGCTGCGCGAAGGCGACGGCATCGGCACGTCCG CCACGCGCGCATCCATCATTTCCGAGCTGAAACGCCGCGCGTTCCTGGAAACCAAGGGCAAGCAGATCGTCAGCACGACG CTGGGCCGCAGCGTCATCGACGCGCTGCCCGAGGTGGTGCGAAGCCCGGTGCTGACCGCCCTTTACGAACGCATGTTGAA GGGCGTCGAGCTGGGCACGGCGGCCCTGGACGCCTTCATCACGAAGCAAGAGCAGTTCATCCGCGACCAGGTGACGAAGG CCAACAGCGGAGCCGTGAGCATCGCCGGCGGCAAGGAAGCCGCGCCGGTGTCGTCCCTGCACAAGTGCATGGCCTGCGGC ACCGGCTTGTCGCGGCGGCCCAGCAAGAAGAAGGGGCAATTCTGGTGGGGCTGCGCCAACTTCCCCACGTGCAAGCAGAC CTATCCCGACCTGAAAGGTCGGCCCGACTACAGCAAGGGCCGCAACGGCCCCGCTGCCGAGTAA Protein sequence : MRLFIAEKPSVAKAIAGELGVTGKGDGYIECGGDKVTWCFGHMLEQADPDEYTPDDVPTGKSGKKLWRVDELPIIPQTWI LHPKDDAKKQLAVIGKLLKEAKEIVNAGDPDREGQLLVDEVLEHFKSSKPTRRFWVSAQDSVSVKRGLAALKDNTTYKGW ADAARGRQRADWLIGMNLSRAYTLRAQRGGSRALLTVGRVQTPTLALVVNRDREIEAFKPVPYHTIRAAIQHEGGTFMAA WKAKEDQAGLDSEGRLVDTAVADALVAAVKGQPGTIATYKQEAKKKNQPLAFALSDITALASARYGYSAEDVLNTCQALY ETHKLTSYPRTDCAYLPESQHADAPRVLEAVKHVNPELAGLVDGADPRIKSKTWDDSKITAHHGIVPTMQKGSKAGLSER ERNIYELIVRAYLAQFYPLHEYMQTTVGVEIAGENFAASGKVVTRNGWRDVFDQADEEDAKEGDDENGAQTLPVMKQGDG VTCTEATRRDAKTKPPARFTEGTLIRAMENIHKFVSDPEHKKMLREGDGIGTSATRASIISELKRRAFLETKGKQIVSTT LGRSVIDALPEVVRSPVLTALYERMLKGVELGTAALDAFITKQEQFIRDQVTKANSGAVSIAGGKEAAPVSSLHKCMACG TGLSRRPSKKKGQFWWGCANFPTCKQTYPDLKGRPDYSKGRNGPAAE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| topB | AAF14809.1 | topoisomerase B | Not tested | SPI-7 | Protein | 3e-117 | 42 |
| topB | NP_458624.1 | topoisomerase B | Not tested | SPI-7 | Protein | 4e-117 | 42 |
| topB | NP_807836.1 | DNA topoisomerase III | Not tested | SPI-7 | Protein | 4e-117 | 42 |
