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Name : Pnap_4396 (Pnap_4396) Accession : YP_973416.1 Strain : Genome accession: NC_008757 Putative virulence/resistance : Unknown Product : integrase catalytic subunit Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4584 EC number : - Position : 314014 - 315552 bp Length : 1539 bp Strand : + Note : PFAM: Integrase, catalytic region; KEGG: pol:Bpro_1938 integrase, catalytic region DNA sequence : ATGCCAACCAACAGAATCACCATGCGCCAAATCCGAGAATCCCTGCGCCTGCACCTGCAGGCCAACCTGAGCTACAACGA GGTAGGCCGTAACCTCAAGATATCCAAAAGCGTAGTCGGCAAATACATGTCACTGGCGCGTGTGGCCGGTGTTGACTGGT CCGTTGCACAAACCTTGAGCGACCAAGAGCTGGAGGCCAAGCTGTACAAGGCAGCGTTACCGCGCAACAGCAAACAAGCA CTGCCTGACTTTGCCCAGATACACACTGAGCTCAAACGCGCCGGTGTCACCCTGCAACTGCTGTGGGAGGAATACGCCAA GGGCAACGACCTGGCCTTCAAGTACACCAGCTTTTGCGTCAAATACCGGGAGTGGGCCATGGGGCTGAAGCGCTCCATGC GCCAGACCCATATTGCCGGTGAGAAACTCTTTGTTGACTACGCCGGTCAAACCGTCCCGCTGATTGATGCCGGCACCGGC GAAATCACCAAGGCACAGATATTTGTGGCCACCCTTGGCGCCTCCAACTACACCTTCGCCTGTGCCACGGCGCGCCAGAC CACAGCCGACTGGATTGGCGCCCAGGTGCTGGCATTGGAGTATTTCGGTGGTGTGCCACGCCTGATCGTGCCAGACCAAA CCCGCTCCCTGATCAAAAACCCGTGCAGCTACGACCCGCAGAACAACCGTCTGTATGAAGAATTCGCCGCCCACTACGGT TGTGCCCTGCTGGCAGCAAGGCCGGCTCACCCCAGAGACAAGCCCAAAGTCGAGAACGCCGTCCTGGTCGTTGAACGCTG GATACTGGCACGCCTGCGTAATCGCAAGTTCTTCAGTCTCATGGAGCTCAACCACGCCATTGCGCTGCTCCTGAACGATT TGAACCAGCGCGCCTTCAAAAAGCTGCCCGGCAACAGGCGCAGTGCCTTTGAGCAGCTTGATGCTCCAGCCCTGCGTCCA CTGCCGGCCAAACGCTTTGAGTTATTCCGCTGGAAATCGGCCAAGGTCAATGTCGACTACCACGTGGAATTTGACGGCCA TTACTACAGCGTGCCCCACACCCTGGTGCGCACCACCGTGGAACTGCGCGCCAGTGACACCTTGCTGGAATGTTATTCCT CCAACCAGCGCGTGGCTTGCCACGCTGTCAGCCCCAAGCGCGGTGCCCACACCACCACGCCTGAGCATATGCCTGCGTCG CACCGGGCGCATCTGGAGTGGACCCCGCAAAAGCTCATCGACTGGGGCCTGCGCATTGGCGTGAGCACCGCAGCGGTGGT GACCTGGCAGCTTGAACACCGCGCCCATCCTGAACAGGGCTACCGGGCTTGTTTGGGCTTGCAGCGCTTGGCACGCGAAT TCACGCCGGCCAGGCTGGAGGCGGCCTGCACCCGAGCACTGGCCATTCGCTCCCTTACCTACCGCAGCGTGGCCTCCATT CTCAAAACAGGCTTGGATCGTCAGCAAAACCTGCCCACCATGACACCGGGCGCGCTCCCGGCGCACGACAACATCCGTGG CGCAGATTATTTCCACTGA Protein sequence : MPTNRITMRQIRESLRLHLQANLSYNEVGRNLKISKSVVGKYMSLARVAGVDWSVAQTLSDQELEAKLYKAALPRNSKQA LPDFAQIHTELKRAGVTLQLLWEEYAKGNDLAFKYTSFCVKYREWAMGLKRSMRQTHIAGEKLFVDYAGQTVPLIDAGTG EITKAQIFVATLGASNYTFACATARQTTADWIGAQVLALEYFGGVPRLIVPDQTRSLIKNPCSYDPQNNRLYEEFAAHYG CALLAARPAHPRDKPKVENAVLVVERWILARLRNRKFFSLMELNHAIALLLNDLNQRAFKKLPGNRRSAFEQLDAPALRP LPAKRFELFRWKSAKVNVDYHVEFDGHYYSVPHTLVRTTVELRASDTLLECYSSNQRVACHAVSPKRGAHTTTPEHMPAS HRAHLEWTPQKLIDWGLRIGVSTAAVVTWQLEHRAHPEQGYRACLGLQRLAREFTPARLEAACTRALAIRSLTYRSVASI LKTGLDRQQNLPTMTPGALPAHDNIRGADYFH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| APECO1_3528 | YP_854247.1 | transposase for ISEc12 | Not tested | PAI I APEC-O1 | Protein | 5e-101 | 45 |
| unnamed | CAC39294.1 | hypothetical protein | Not tested | LPA | Protein | 8e-101 | 45 |
| ORF_6 | AAZ04417.1 | putative transposase subunit | Not tested | PAI I APEC-O1 | Protein | 4e-101 | 45 |
| VPI2_0005c | ACA01822.1 | IstA | Not tested | VPI-2 | Protein | 1e-103 | 42 |
