|
Name : Pnap_4268 (Pnap_4268) Accession : YP_973293.1 Strain : Genome accession: NC_008757 Putative virulence/resistance : Unknown Product : DNA-repair protein Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0389 EC number : - Position : 155091 - 156239 bp Length : 1149 bp Strand : - Note : PFAM: UMUC domain protein DNA-repair protein; KEGG: rfr:Rfer_4341 DNA-directed DNA polymerase DNA sequence : ATGGGCGCGCCCTGGTTCGAGATCGAGCACCTGGCCGAGTCAAGCGGGCTGGTGGCGCTGTCGGCCAACTTCGCGCTGTA CGGCGACATGAGCGACCGCATGATGAGCCTGGCCGCCGGCCTCGGGCCGGCGCAGGAAATCTACTCGATCGACGAATCGT TCATCGACCTGGCTGGCGTGCTCGGTGACCTGGTGCAGCGCGGCCTCAAGGTGCGCGAGCGCATCCTGCAGTGGACGGGC ATCCCCTGCGGCATCGGCATCGGCGCGACAAAAACCCTGGCCAAGCTGGCCAACCACATCGCGAAAACTGCCGAGCGCAA GCCGGGAAGCTATCCCGCGACCATGGCGCAGGTGTGCGACCTGTCGGCCCTGGCGCCGGAAGCGCTGCAAGAAGTGCTGG CCGCCACGGCCGTGAATGAGGTCTGGGGCGTCGGGCGGCGCCTGACGGCCCAGCTCAGCGAATGCGGCATCCACACTGCG CAAGATTTGGCTGGGCTCGACCCCGCGATGGTGCGCCGGCGCTGGTCGGTGGTGCTCGAGCGCACGGTGCGCGAGCTGCA GGGGATGGCGTGCATTGCATTGGAATTGGCCCCGGCGCGTAAGCACGAAATTGCCTGCACCCGCTCGTTCGGGCAGCCGG TCACTCGTCTAGCGGACCTCAATGAAGCGGTCACAGAGTTCGCCAGCCGGGCGGCGCACAAACTGCGCCAGCAAGGCAGC CTGGCCGGCCAGGTGCTGGTGTTTATCCGCACCAGCCCGTTTCGGCCAGAAGCGCAGTTCAGCCGCTCGATCAGCATGCC GCTGCGCCGTCCCAGCGCCGATACCGGTGTGATCGTTTCGGCAGCGCTCAGGGGCCTGCACGCCATTTACCGGCCTGGCT ACCAGCTGGCCAAGGCCGGGGTCATGCTGTTCGACCTCCAGCCCACCACGGTGCTGCAGGCCGAGCTGGATTTGCAACGC GACGAAGCACCAGACAGACGCAGGCTGATGACAACGCTGGATGACATCAACCAGCGCTACGGCCCGAGCACCGTGCAGAT GGCCAGCGCCGGGCTGGCGGGCGACAGGAGGGCCTGGACGATGAAACAGGAGCGGCGCACGCCGGGCTACATCACGTGCT GGGCGGATATGCCGGTGGCGCGGGCTTGA Protein sequence : MGAPWFEIEHLAESSGLVALSANFALYGDMSDRMMSLAAGLGPAQEIYSIDESFIDLAGVLGDLVQRGLKVRERILQWTG IPCGIGIGATKTLAKLANHIAKTAERKPGSYPATMAQVCDLSALAPEALQEVLAATAVNEVWGVGRRLTAQLSECGIHTA QDLAGLDPAMVRRRWSVVLERTVRELQGMACIALELAPARKHEIACTRSFGQPVTRLADLNEAVTEFASRAAHKLRQQGS LAGQVLVFIRTSPFRPEAQFSRSISMPLRRPSADTGVIVSAALRGLHAIYRPGYQLAKAGVMLFDLQPTTVLQAELDLQR DEAPDRRRLMTTLDDINQRYGPSTVQMASAGLAGDRRAWTMKQERRTPGYITCWADMPVARA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABR13403.1 | DNA-directed DNA polymerase | Not tested | PAGI-5 | Protein | 1e-61 | 44 |
| rulB | CAI36137.1 | nucleotidyltransferase/DNA polymerase | Not tested | PPHGI-1 | Protein | 7e-63 | 42 |
| samB | NP_458681.1 | UV protection protein | Not tested | SPI-7 | Protein | 7e-57 | 41 |
| umuC | NP_807889.1 | DNA polymerase V subunit UmuC | Not tested | SPI-7 | Protein | 7e-57 | 41 |
