Gene Information

Name : Aave_0949 (Aave_0949)
Accession : YP_969321.1
Strain : Acidovorax citrulli AAC00-1
Genome accession: NC_008752
Putative virulence/resistance : Virulence
Product : UDP-glucose/GDP-mannose dehydrogenase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0677
EC number : -
Position : 1034943 - 1036241 bp
Length : 1299 bp
Strand : +
Note : PFAM: UDP-glucose/GDP-mannose dehydrogenase; KEGG: msu:MS1501 WecC protein

DNA sequence :
ATGATGAACCTGGAAAATGCAACCATTGCCGTGATCGGCCTGGGCTACGTGGGCTTGCCACTGGCCGTTGAATTCGGAAA
GCAACGCCCTGTGCTGGGGTTTGACATCAACGCGGAACGCATCGCGGAACTGCAGTCCGGCAAAGACGGCACTCTTGAGG
TAACGTCCGAGGATCTGAGGGCGGCAACCCATCTGCGCTACAGCGCGGACCCGGAAGACCTCAAGGATTGCGGAATCTTC
ATCGTGACCGTGCCGACCCCGGTGGACACTGCCAATCGGCCCGACATGACGCCGCTGGTCAAGGCCAGCGAGACGGTAGG
CCGCGCCATGCCACAGGGGGCTGTGGTGATCTACGAGTCCACCGTGTATCCCGGTGCAACGGAGGAGGTGTGCGTCCCCG
TGCTGGAACGTTGCAGCGGCAAGACATTCAACACCGGTTTCTTCTGTGGCTACAGCCCCGAGCGCATCAATCCGGGCGAC
AAGGTCAACACGCTTACCAAGATCCGGAAAATCACCAGCGGCAGCACCCCTGAAGTGGCGGATGCCGTGGACGCTCTCTA
CGCCGAGATCATCACCGCAGGCACCCACAAGGCGAGCAGCCTGAAGGTGGCCGAAGCCGCGAAGGTCATCGAAAACACGC
AGCGCGACCTCAATATCGCCCTGGTAAACGAACTGTCGGTCATCTTCGAGCGATTGGGGATCGATACGCTCGACGTGCTG
GAAGCCGCCGGCAGCAAGTGGAACTTCCTGCCTTTCCGGCCGGGGCTCGTGGGCGGCCACTGCATTGGGGTGGACCCGTA
CTATCTGACCCATAAGGCCGAGGAAGTGGGCTACCACCCTCAGGTCATCCTGGCCGGACGGCGCATCAACGACAACATGG
CGCGCTACGTGGCGCGAAACACCATCCGGCTGATGCTGCGCAACGGCATGGACGTTCCCCGGTGCCGCATCGGTGTCCTG
GGCATCACGTTCAAGGAGAACTGCCCGGACATCCGCAACAGCAAGGTTGTGGACATGGTGCGGGAGTTCGAATCCTGGGG
CGCCAATGTGGTCGTCTGTGATCCATGGGCCAATGCGCAGGACGTGCAGCACGAATATGGCATCTCCCTGGGAAGCGTGT
CCGCGCAGGAACCCGTCGATGCGCTGGTCGTTGCGGTGGGTCACCACCAGTTCCGTGAAGCCAGCCTTTCCGAACTGCGC
GCCTTCTGTCGCGGCGACCGCCCCGTGCTGGCTGACGTCAAGAGCCTCCATGACCGCCACCAGGCCGTGGCATCCGGCTT
CACCGTGTTCCGTCTGTGA

Protein sequence :
MMNLENATIAVIGLGYVGLPLAVEFGKQRPVLGFDINAERIAELQSGKDGTLEVTSEDLRAATHLRYSADPEDLKDCGIF
IVTVPTPVDTANRPDMTPLVKASETVGRAMPQGAVVIYESTVYPGATEEVCVPVLERCSGKTFNTGFFCGYSPERINPGD
KVNTLTKIRKITSGSTPEVADAVDALYAEIITAGTHKASSLKVAEAAKVIENTQRDLNIALVNELSVIFERLGIDTLDVL
EAAGSKWNFLPFRPGLVGGHCIGVDPYYLTHKAEEVGYHPQVILAGRRINDNMARYVARNTIRLMLRNGMDVPRCRIGVL
GITFKENCPDIRNSKVVDMVREFESWGANVVVCDPWANAQDVQHEYGISLGSVSAQEPVDALVVAVGHHQFREASLSELR
AFCRGDRPVLADVKSLHDRHQAVASGFTVFRL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tviB NP_458740.1 Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase Virulence SPI-7 Protein 4e-123 59
tviB NP_807945.1 VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase Virulence SPI-7 Protein 4e-123 59
cap1L AAA64651.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 4e-110 58

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Aave_0949 YP_969321.1 UDP-glucose/GDP-mannose dehydrogenase VFG0431 Protein 2e-123 59