Gene Information

Name : Aave_0829 (Aave_0829)
Accession : YP_969201.1
Strain : Acidovorax citrulli AAC00-1
Genome accession: NC_008752
Putative virulence/resistance : Unknown
Product : thiamine biosynthesis protein ThiC
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0422
EC number : -
Position : 898143 - 899996 bp
Length : 1854 bp
Strand : +
Note : required for the synthesis of the hydromethylpyrimidine moiety of thiamine

DNA sequence :
ATGAACGCCCCCGACAAGTTCGCCCAGCTGCTCGCGCTGACCCGCGAACCCTTCCCCGCCTCCACCAAGAACTACCTCAT
CGGCAGCCGCCCCGACGTGCGCGTGCCCGTGCGAGATATCGCGCTCACCAACGGCGAGCAGGTCAGCGTGTACGACACCT
CAGGCCCCTACACCGACCCGGCTGCCGAGATCGACGTGCGCCGGGGCCTGCCCAGCGTGCGTGGCGCGTGGATCGAGGGC
CGGGGCGACACCGAGCGCTACGAAGGCCGCCAGCGGGTGGCGCTGGACGACGGCAGCAAGTCGGAAGACGCCGCCCGCCT
GGCCCAGCTGCGCGCCGAGGCCGCCGCGCTGCAGCGCGCGCCCCTGCGCGCGAAGAGCGGCGCCAGCCACACCGGCAATG
TCACGCAGATGCACTACGCGAAGAAGGGCATCGTCACGCCCGAGATGGAGTACGTGGCCCTGCGCGAGAACGGCCGCCGC
GAATGGATGGCGCAGTATCAGCAGGACGCGGCGCGCGAGCAGCGCCTGGCCGGCAACCCGATGGGCGCGAGCATCCCGAA
GATCATCACGCCCGAATTCGTGCGCGACGAAGTGGCGCGGGGCCGGGCCATCATCCCGGCCAACATCAACCACCCCGAGG
TCGAGCCCATGGCCATCGGGCGCACCTTCAAGGTGAAGATCAACGCAAACATCGGCAATTCGGCCGTCACCTCCAGCATC
GAGGAAGAGGTGGAAAAGCTGGTCTGGGCGATCCGCTGGGGCGCGGACAACGTGATGGACCTCTCCACCGGCAAGAACAT
CCACACCACGCGCGACTGGATCGTGCGCAACAGCCCCGTGCCCATCGGCACCGTGCCCATCTACCAGGCGCTGGAGAAGG
TGGGGGGCATCGCCGAGGACCTGACCTGGGAGATCTTCCGCGACACGCTCGTCGAGCAGGCCGAGCAGGGCGTGGACTAC
TTCACCATCCATGCGGGCGTGCGGCTGGCCTTCATCCACCTGACTGCGCAGCGGCGCACGGGCATCGTCTCGCGCGGCGG
CTCCATCATGGCCAAGTGGTGCATGGCCCACCACCGCGAGAGCTTCCTCTACGAGCACTTCGAGGACATCTGCGACATCA
TGAAGCAGTACGACGTCAGTTTCAGCCTGGGCGACGGCCTGCGGCCCGGCTGCGCGTCCGATGCCAACGACGAGGCGCAG
TTCGCCGAACTGCGCACGCTGGGCGAATTGACGCGGACCGCCTGGAAGCACGACGTGCAGACCATGATCGAGGGCCCCGG
CCACGTGCCCATGCACATGATCCAGGCCAACATGACCGAGCAGCTCAGGACCTGCCATGAAGCACCGTTCTACACGCTCG
GGCCGCTGACCATCGACATCGCCCCCGGCTACGACCACATCGCCAGCGCCATCGGCGCGGCCATGATCGGCTGGATGGGC
ACGGCCATGCTCTGCTACGTGACGCCCAAGGAGCACCTGGGCCTGCCCGACCGCGACGACGTGAAGCAGGGGATCATCGC
GTACAAGATCGCGGCCCATGCGGCCGACGTGGCCAAGGGCCATCCGGGGGCCCGCGCGCGCGACGACGCGCTCAGCCAGG
CGCGCTTCGACTTCCGCTGGCAGGACCAGTTCAACCTGGGCCTGGACCCGGAAACCGCGCAGCAGTACCACGACGAGACC
CTGCCCAAGGATTCGGCCAAGGTGGCGCACTTCTGCTCGATGTGCGGCCCGAAGTTCTGCTCGATGAAGATCACGCAGGA
AGTGCGCGAATTCGCGGCGCAGGGCATGCAGGAGAAAGCCCGGGAGTTCCGCGGCACGGGCGGGGAACTGTACGTGCCGA
TCCAGCCGGCATGA

Protein sequence :
MNAPDKFAQLLALTREPFPASTKNYLIGSRPDVRVPVRDIALTNGEQVSVYDTSGPYTDPAAEIDVRRGLPSVRGAWIEG
RGDTERYEGRQRVALDDGSKSEDAARLAQLRAEAAALQRAPLRAKSGASHTGNVTQMHYAKKGIVTPEMEYVALRENGRR
EWMAQYQQDAAREQRLAGNPMGASIPKIITPEFVRDEVARGRAIIPANINHPEVEPMAIGRTFKVKINANIGNSAVTSSI
EEEVEKLVWAIRWGADNVMDLSTGKNIHTTRDWIVRNSPVPIGTVPIYQALEKVGGIAEDLTWEIFRDTLVEQAEQGVDY
FTIHAGVRLAFIHLTAQRRTGIVSRGGSIMAKWCMAHHRESFLYEHFEDICDIMKQYDVSFSLGDGLRPGCASDANDEAQ
FAELRTLGELTRTAWKHDVQTMIEGPGHVPMHMIQANMTEQLRTCHEAPFYTLGPLTIDIAPGYDHIASAIGAAMIGWMG
TAMLCYVTPKEHLGLPDRDDVKQGIIAYKIAAHAADVAKGHPGARARDDALSQARFDFRWQDQFNLGLDPETAQQYHDET
LPKDSAKVAHFCSMCGPKFCSMKITQEVREFAAQGMQEKAREFRGTGGELYVPIQPA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00317 YP_008207782.1 Thiamine biosynthesis protein ThiC Not tested AbaR25 Protein 0.0 66
BJAB0868_00321 YP_008211647.1 Thiamine biosynthesis protein ThiC Not tested AbaR26 Protein 0.0 66
thiC YP_001598318.1 thiamine biosynthesis protein ThiC Not tested MDA Protein 0.0 64