Gene Information

Name : Aave_0706 (Aave_0706)
Accession : YP_969081.1
Strain : Acidovorax citrulli AAC00-1
Genome accession: NC_008752
Putative virulence/resistance : Unknown
Product : integrase catalytic subunit
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 764199 - 765056 bp
Length : 858 bp
Strand : +
Note : PFAM: Integrase, catalytic region; KEGG: mxa:MXAN_4473 transposase orfB, IS3 family

DNA sequence :
ATGTGCCGGGTGCTGGGCGTGTCCCACAGCGGCTTCTACGACTGGCGGCACCGAGCGCCAAGCCAGCGCGCGATGGAGGA
CATGGTGCTCACCGAGCGGATCAGGCAGGTGCACGCCGAGTCCCGCGAGACCTACGGCCAGCCACGCGTGCGGGCCGAGT
TGGCCGCACAGGGCGTGCGCGTCGCAGGCAAGCGGATCGCCCGCCTCATGCGCCAGGCAGGCCTGCAGGGGATCAGCAAA
CGACGGGCGACCACGGTGACCACGCGGCGTGACCCACGCGAGCGTCCAGCGGCGGACCTCGTGATGCGACGCTTCCGCGC
CGAGCGAGCGAACCAGCTGTGGGTGGCCGACATGACCTATGTGCCGACGTGGGCAGGCTTCGTCTACCTGGCGGTGGTGA
TGGACGTCTTCAGCCGGCGCATCGTCGGCTGGTCGATGGGAGAGCGCATGACCGCGCAACTCGTGCTGGCGGCGCTGAAC
ATGGCATTGGCCCGACGCAAGCCCCAGGGTGTCATCCACCACTCGGACCAGGGCAGCCAGTACACCAGCCTGGCGTTCGG
GCAACGCTGCGCCGAGATGGGTGTGCGCCCGTCGATGGGCAGTGTGGGTGACGCGTACGACAACGCCATGGCCGAGAGCT
TCTTCGCCACGCTCGAATGCGAGCTGATCGAGCGGCGCAGCTTCCGATCGAAGGCGGAGGCGAAGGCCGCGGTGTTCAGC
TACATCGAGGGCTGGTACAACCCGCGCCGACGCCACTCCGCGCTGAGCTACCACTCACCCGTGGAGTTCGAGCGCCGCGT
CGTCGCCGAGGCGTGTCAGGCAACGGAGATCAACGAGAGAGACCAAATCCCGGCTTGA

Protein sequence :
MCRVLGVSHSGFYDWRHRAPSQRAMEDMVLTERIRQVHAESRETYGQPRVRAELAAQGVRVAGKRIARLMRQAGLQGISK
RRATTVTTRRDPRERPAADLVMRRFRAERANQLWVADMTYVPTWAGFVYLAVVMDVFSRRIVGWSMGERMTAQLVLAALN
MALARRKPQGVIHHSDQGSQYTSLAFGQRCAEMGVRPSMGSVGDAYDNAMAESFFATLECELIERRSFRSKAEAKAAVFS
YIEGWYNPRRRHSALSYHSPVEFERRVVAEACQATEINERDQIPA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
S4063 NP_839232.1 IS629 orfB Not tested SHI-2 Protein 4e-36 47
Z4334 NP_289559.1 IS629 transposase Not tested OI-122 Protein 9e-37 47
unnamed AAL67406.1 putative transposase Not tested PAI II CFT073 Protein 1e-41 46
c5167 NP_757015.1 transposase IS629 Not tested PAI II CFT073 Protein 2e-31 45
Z1134 NP_286669.1 hypothetical protein Not tested TAI Protein 1e-43 44
Z1573 NP_287077.1 hypothetical protein Not tested TAI Protein 1e-43 44
c5178 NP_757026.1 transposase IS629 Not tested PAI II CFT073 Protein 4e-42 44
unnamed AAL67398.1 putative transposase Not tested PAI II CFT073 Protein 2e-42 44
tnp7109-25 YP_001800853.1 transposase for insertion sequence Not tested Not named Protein 1e-41 44
unnamed AAQ07468.1 TnpI-like protein Not tested Not named Protein 4e-42 43
hp1 AAC61713.1 Hp1 Not tested PAI I CFT073 Protein 3e-43 43
unnamed AAB86997.1 hypothetical 31 KD protein Not tested SHI-1 Protein 3e-43 43
unnamed AAF09030.1 unknown Not tested SHI-O Protein 3e-43 43
c3575 NP_755450.1 transposase insF Not tested PAI I CFT073 Protein 4e-43 43
tnpI AAD44751.1 TnpI Not tested SHI-2 Protein 3e-43 43
unnamed AAF09022.1 unknown Not tested SHI-O Protein 1e-43 43
ORF_34 AAZ04444.1 putative IS629 transposase Not tested PAI I APEC-O1 Protein 6e-42 43
APECO1_3499 YP_854312.1 transposase for IS629 Not tested PAI I APEC-O1 Protein 8e-42 43
ECO103_3585 YP_003223443.1 IS629 transposase OrfB Not tested LEE Protein 2e-40 43
Z1198 NP_286733.1 transposase Not tested TAI Protein 2e-41 43
IS629 CAC37926.1 transposase for IS629 Not tested LEE Protein 1e-40 43
Z1638 NP_287141.1 transposase Not tested TAI Protein 2e-41 43
IS629 CAI43821.1 transposase for IS629 Not tested LEE Protein 1e-40 43
Z1221 NP_286756.1 transposase Not tested TAI Protein 2e-41 43
IS629 CAI43909.1 transposase for IS629 1 Not tested LEE Protein 1e-40 43
Z1660 NP_287162.1 transposase for IS629 Not tested TAI Protein 2e-41 43
ECO111_3721 YP_003236061.1 putative IS629 transposase OrfB Not tested LEE Protein 1e-42 43
ECO111_3776 YP_003236111.1 putative IS629 transposase OrfB Not tested LEE Protein 1e-42 43
c5213 NP_757061.1 transposase IS629 Not tested PAI II CFT073 Protein 8e-43 43
tnpA1133 ACK44540.1 TnpA Not tested SGI1 Protein 3e-52 42
orfB AGK07032.1 IS1133 transposase; OrfB Not tested SGI1 Protein 3e-52 42
orfB AGK07090.1 IS1133 transposase; OrfB Not tested SGI1 Protein 3e-52 42
IS629 CAI43840.1 transposase for IS629 Not tested LEE Protein 6e-40 42
unnamed AAL57519.1 transposase 1 Not tested LEE Protein 2e-34 41
unnamed AAL57581.1 transposase 1 Not tested LEE Protein 1e-34 41
ECO111_3732 YP_003236068.1 putative IS3 transposase InsF Not tested LEE Protein 3e-34 41
unnamed CAD42083.1 hypothetical protein Not tested PAI II 536 Protein 3e-39 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Aave_0706 YP_969081.1 integrase catalytic subunit VFG1706 Protein 2e-43 43
Aave_0706 YP_969081.1 integrase catalytic subunit VFG1602 Protein 2e-39 41